Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_006651.1 Length=19161 Score E Sequences producing significant alignments: (Bits) Value seq63574 86.0 8e-13 seq26413 86.0 8e-13 seq9540 84.2 3e-12 seq22129 82.4 9e-12 >seq63574 Length=1139 Score = 86.0 bits (94), Expect = 8e-13 Identities = 82/104 (79%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 3329 TGAGAGACGTTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGG 3388 ||| | |||| ||| || ||||||||| || | |||||||||||||| || ||||||| Sbjct 110 TGAAAAACGTCTTTCGTAAGGTAGAAAAAGAAGAAAAACTTTCAGCCAATTCTAAAGGGG 169 Query 3389 TCAGGGTCAAAAATGGTTGATTTGGCGTGGAATGCCCCATAGAT 3432 || |||| ||| |||| || |||| |||||| ||||||| || Sbjct 170 TC-GGGTTCAAAGTGGTCGAATTGGGATGGAATACCCCATATAT 212 >seq26413 Length=1529 Score = 86.0 bits (94), Expect = 8e-13 Identities = 82/104 (79%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 3329 TGAGAGACGTTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGG 3388 ||| | |||| ||| || ||||||||| || | |||||||||||||| || ||||||| Sbjct 216 TGAAAAACGTCTTTCGTAAGGTAGAAAAAGAAGAAAAACTTTCAGCCAATTCTAAAGGGG 157 Query 3389 TCAGGGTCAAAAATGGTTGATTTGGCGTGGAATGCCCCATAGAT 3432 || ||||| ||| |||| || ||| |||||| ||||||| || Sbjct 156 TCGGGGTC-AAAGTGGTCGAAATGGGATGGAATACCCCATATAT 114 >seq9540 Length=2053 Score = 84.2 bits (92), Expect = 3e-12 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 3335 ACGTTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGGTCAGGG 3394 |||| ||| || ||||||||| || | |||||||||||||| || ||||||||| || Sbjct 1606 ACGTCTTTCGTAAGGTAGAAAAAGAAGAAAAACTTTCAGCCAATTCTAAAGGGGTCGGGT 1547 Query 3395 TCAAAAATGGTTGATTTGGCGTGGAATGCCCCATAGATA 3433 ||||| |||| || ||| |||||| ||||||| ||| Sbjct 1546 TCAAAGTTGGTCGAAATGGGATGGAATACCCCATATATA 1508 >seq22129 Length=1426 Score = 82.4 bits (90), Expect = 9e-12 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 3329 TGAGAGACGTTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGG 3388 ||| | |||| ||| || ||||||||| || | |||||||||||||| || ||||||| Sbjct 1273 TGAAAAACGTCTTTCGTAAGGTAGAAAAAGAAGAAAAACTTTCAGCCAATTCTAAAGGGG 1214 Query 3389 TCAGGGTCAAAAATGGTTGATTTGGCGTGGAATGCCCCAT 3428 || || ||||| |||| || ||| |||||| |||||| Sbjct 1213 TCGGGTTCAAAGTTGGTCGAAATGGGATGGAATACCCCAT 1174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 61149425568224