Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq60449 120 6e-23 >seq60449 Length=4483 Score = 120 bits (132), Expect = 6e-23 Identities = 237/345 (69%), Gaps = 7/345 (2%) Strand=Plus/Minus Query 5308 TAAACTCTCGCCACATTTTCGTCTTAAGTGTTCTATTGAAACGTTC-ACATATGGATGCT 5366 |||| ||||||||||| ||| | |||||||||||| | ||| ||| || |||||| Sbjct 2697 TAAATTCTCGCCACATCAATCCCTTTAATGTTCTATTGAATCTTTCTACA-ATAGATGCT 2639 Query 5367 TTGAGATTGCTGAATGTTGAATACAGATTTATCTTGTGCTGCTTC-ATCAGATCTTTGAA 5425 |||||| ||||||||| ||||| |||| || | || | |||| || | || ||| || Sbjct 2638 TTGAGAACGCTGAATGTAGAATAGTGATTAATAT-GTTTTACTTCCATTAAATGTTTAAA 2580 Query 5426 TTCTTTGTTGTAAAACTCTTTACCCTGATCAACATGGAGATTCTTAGGGA---TACGACC 5482 || ||||| ||||||||||||| | ||| || | ||| || || | | | || Sbjct 2579 TTTATTGTTAAAAAACTCTTTACCGTCATCTGTTTGCAAATTTTTTGGTACTCTTCTACT 2520 Query 5483 TTGCTGAAGTACAGACTTCATAGCACTTGTGACATCTACACCACTTTTAGACTTAATTGG 5542 | || || || ||||||| |||| | | | ||||| ||||| || | || Sbjct 2519 ACTATCAAATATAGTTCGCATAGCATTTGTAATACTTTCACCAGTTTTATTTTTTACTGC 2460 Query 5543 AACTGCCCAGGCATATTTTGAAAATATATCTATGATTGTAAGCAGATACTTGTATCCTTT 5602 |||| || | ||||||||| |||| || | ||| | || || || || || Sbjct 2459 TCTACCCCATGCTTTTTTTGAAAAGGTATCAATTACTGTTAAAAGGTAGCGATAACCCTT 2400 Query 5603 ATTGACTGTTGCATATGGAATCATCTCAACCAAGTCAGCTTGCCA 5647 ||| || || |||| ||||| |||||||| ||||||||||| Sbjct 2399 ATTATCTTTTTCATAATTTATCATTTCAACCAAATCAGCTTGCCA 2355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97896504963408