Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq3939 111 5e-20 >seq3939 Length=2233 Score = 111 bits (122), Expect = 5e-20 Identities = 196/283 (69%), Gaps = 16/283 (6%) Strand=Plus/Plus Query 46134 GCGCGTGTCGAATATCGCCCAATGACAAACGCCATTAAGCA-GAGCAAGGAAGCCGAGGG 46192 || ||| | || || |||||||||||| ||||||| ||||| |||| || |||| |||| Sbjct 1151 GCCCGTCTTGAGTACCGCCCAATGACAGACGCCATCAAGCATGAGCGAG-AAGCGCAGGG 1209 Query 46193 AAAAGAA---GCTGAGCATTACCACTTCAGCAATGAAGCTAACCTCATAAACCGGATCGT 46249 || | ||| |||| ||||||||||| || || |||| || ||| | |||| Sbjct 1210 CAAGGCCATTGCTCCGCAT---CACTTCAGCAACGAGGCCGACCTGATTAACTGTATCGC 1266 Query 46250 GCTGGGAACCACTGCGGCTAAATTCCGCAAAGAGAATGATATCGGCAAAACAGAAGCAAT 46309 || || | ||||||||| | | || |||| || | ||| |||| Sbjct 1267 ACTTGGTNGAA--------AAATTCCGCGTTTACCACGAAATCGAGAAGAAAGAGTCAAT 1318 Query 46310 CCGGGATTACCTTACCGCTGAGCAGATCCGCGCAATTACTGAATTGCAACGTGCTGATAC 46369 ||| || || || || | ||||| ||||| || || || | |||||||| | || Sbjct 1319 CCGCGACTATCTGACACCGGAGCAAATCCGTTGCATCACGGAGCTTCAACGTGCCAACAC 1378 Query 46370 AGTCTTCATCAACATGGGGTGGGACTTTGAACGACGCAAAGCC 46412 || |||||| |||||| ||||||||||||| |||||||||| Sbjct 1379 GGTATTCATCGGCATGGGCTGGGACTTTGAACAACGCAAAGCC 1421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149839174824288