Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq25972 96.9 4e-15 >seq25972 Length=1146 Score = 96.9 bits (106), Expect = 4e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 131864 ATGACTCCTGTTAAACCTATGTTGGCTGATGTATGCGAATCTCTAGAAAAAGCAATAGAT 131923 ||||||||| | ||| |||||||| ||| ||| |||| |||| | ||| | | Sbjct 272 ATGACTCCTATATCACCAATGTTGGCAAATGCTTGCAAATCAGTAGACCAGGCATTCAAA 213 Query 131924 AAATATAAAGATGGAATGTATTCAGAGGTAAAATATGATGGGGAGCGTGTACAAATTCAT 131983 || | | |||| |||| | || |||| |||||||| ||||| || ||||| ||| Sbjct 212 AAGTGCCCAAATGGTTTGTACACCGAAATAAAGTATGATGGTGAGCGCGTGCAAATACAT 153 Query 131984 AAAAAAGATAATGTATACAATTATTTTAGTAGAAATTTAAAACCTGTTCTTACTCATAAA 132043 || | | ||||| || ||| | ||||||| ||||||||||||| ||| | ||| ||| Sbjct 152 AAGCAGGGTAATGAATTCAAATTTTTTAGTCGAAATTTAAAACCGGTTATGGATCACAAA 93 Query 132044 ATT 132046 ||| Sbjct 92 ATT 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531455652220480