Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq44371 113 4e-20 seq25273 89.7 4e-13 >seq44371 Length=3624 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 115284 AAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCA 115343 |||||||||||||||| ||||| || ||||| |||||||| || | || || | Sbjct 1323 AAATGCAAATTTTTGTTAAAACTCTTACGGGTAAAACCATCACACTTGAGGTTGAACCTT 1264 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 || ||| ||| ||| || ||| || ||| || || ||||| | || ||| | Sbjct 1263 CGGATACTATTGAACATGTTAAAGCTAAGATTCAAGACAAGGAAGGAATTCCACCTGACC 1204 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 ||||| | | |||| || ||||||||||| ||||| | |||| |||| ||||||| Sbjct 1203 AGCAACGCTTAATTTTCGCTGGCAAACAATTGGAAGACGGACGAACCTTGGCTGATTATA 1144 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGA 115513 |||||||||| || ||||| | ||| | || ||| | | |||||||| Sbjct 1143 ACATTCAAAAGGAATCTACGTTGCATCTAGTATTGCGTCTCAGAGGAGGA 1094 >seq25273 Length=2210 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || || || || | || || |||||||| ||| | ||| ||| | | Sbjct 2193 ATGCAAATCTTCGTGAAGACTTTGACTGGCAAAACCATCACCTTGGAAGTCGAGCCATGT 2134 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 |||||| | | | ||||| ||||| |||||||||||| | ||| ||||| Sbjct 2133 GACACTATCGAGAACGTAAAGGCTAAAATCCAAGATAAAGAAGGCATTCCCCCAGATCAA 2074 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | | |||| || ||||| ||||| ||||||| | || || |||| || ||| Sbjct 2073 CAACGTTTAATTTTCGCTGGCAAGCAATTGGAAGATGGCCGTGCCTTGTCCGACTACAAC 2014 Query 115466 ATTCAAAAAGAGTCTAC 115482 || ||||| |||||||| Sbjct 2013 ATCCAAAAGGAGTCTAC 1997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424996928866240