Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq44017 147 3e-30 >seq44017 Length=1387 Score = 147 bits (162), Expect = 3e-30 Identities = 282/411 (69%), Gaps = 5/411 (1%) Strand=Plus/Minus Query 61871 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 61930 || ||||| ||||||| ||| ||||| || ||||| ||||| |||| || |||||| Sbjct 410 GCCGGTTTGGTACGTAAATAATACATGCCAGTTTTGAGACCCGCCTTCCAACCATAAAAA 351 Query 61931 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 61990 || ||| ||||| ||| ||| | || || |||| ||| ||||| | ||||||||| Sbjct 350 TGTATAGATGTTAGCTTGCCATAGTTTGGTTCAGCTACATGTATATTAAACGATTGACTT 291 Query 61991 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCC 62050 ||||| || || || || | || || ||||| || || | ||||| | |||||| Sbjct 290 TGATCAATAAACGCGCCACGATCAGCGGCCATCTTCATTGTAGTCTTCACCGATATTTCC 231 Query 62051 CAAATAGTTTTATAAA-CTCGCTTAATATCTTCTGG-AAGGTTTGTATTC--TGAATGGA 62106 || | ||| || |||| || | | || | || ||| | | || || | || || || Sbjct 230 CACACAGTCTTGTAAAGTTCACGT-ATTTTTTGTGGTATAGATTCAATACCTTGTATTGA 172 Query 62107 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62166 |||| | | ||||| || | || || || |||| ||| || ||||| | Sbjct 171 ACCACGACTGGTTATAATTTTAGTTTTCATTTCTTCATCCCACAAACCCAATTCGGTAAG 112 Query 62167 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 62226 | | | | | ||| ||||||| ||||||||||| || || | ||| | ||| | || Sbjct 111 ATCGCGCAACAAATGATGATTAACAACTTGAAATTCGCCCGAAAGTACGCGACGATTATA 52 Query 62227 AATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGC 62277 ||| ||| ||||| ||||| | ||| |||||||| |||| |||||| || Sbjct 51 AATGTTAGAAGTATAAGGTTCAAAAGATTCATTATTGCCCATAATTTGTGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633101713379200