Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq44371 111 1e-19 seq25273 89.7 4e-13 >seq44371 Length=3624 Score = 111 bits (122), Expect = 1e-19 Identities = 171/243 (70%), Gaps = 1/243 (0%) Strand=Plus/Minus Query 111185 AAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCA 111244 |||||||||||||||| ||||| | || || |||||||| || | || ||||| Sbjct 1323 AAATGCAAATTTTTGTTAAAACTCTTACGGGTAAAACCATCACACTTGAGGTTGAACCTT 1264 Query 111245 GCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATC 111304 ||| || ||| || || ||| || ||| ||||| ||||| |||| || | Sbjct 1263 CGGATACTATTGAACATGTTAAAGCTAAGATTCAAGACAAGGAAGGAATTCCACCTGACC 1204 Query 111305 AACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 111364 | ||| | | |||| || ||||||||||||||||| ||| |||| ||||||| Sbjct 1203 AGCAACGCTTAATTTTCGCTGGCAAACAATTGGAAGACGGACGAACCTTGGCTGATTATA 1144 Query 111365 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAATAAATAAA 111424 | || ||||| |||||||| | ||| |||| |||||||| | || || |||| ||| Sbjct 1143 ACATTCAAAAGGAATCTACGTTGCATCTAGTATTGCGTCTCAGAGGAGGAGCTAAA-AAA 1085 Query 111425 CGT 111427 ||| Sbjct 1084 CGT 1082 >seq25273 Length=2210 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||| || || || || |||| ||||||||||| ||| ||||| || || | Sbjct 2193 ATGCAAATCTTCGTGAAGACTTTGACTGGCAAAACCATCACCTTGGAAGTCGAGCCATGT 2134 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || || | | | ||||| ||||| || ||||||||| ||||| |||||| Sbjct 2133 GACACTATCGAGAACGTAAAGGCTAAAATCCAAGATAAAGAAGGCATTCCCCCAGATCAA 2074 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | | |||| || ||||| |||||||||||| | || |||| || || Sbjct 2073 CAACGTTTAATTTTCGCTGGCAAGCAATTGGAAGATGGCCGTGCCTTGTCCGACTACAAC 2014 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||| || ||||| || || || || | || |||| ||||| Sbjct 2013 ATCCAAAAGGAGTCTACCCTTCACTTGGTCCTCCGCTTGCGTGGTGG 1967 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||||||||| || |||| ||||| || || || | ||| || || | Sbjct 1965 ATGCAAATTTTTGTCAAGACATTGACAGGCAAGACTATCACTTTAGAAGTTGAGCCATCC 1906 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| || ||| | ||||| || || || || || || |||| ||||| Sbjct 1905 GATACTATTGAAAATGTAAAGGCCAAGATCCAAGATAAGGAGGGTATTCCTCCAGATCAG 1846 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | | || | ||| ||||| || |||| || ||| | ||||| ||||| Sbjct 1845 CAACGTTTAATCTTTGCTGGCAAGCAGCTGGAGGACGGACGTACTCTAGCCGACTATAAC 1786 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111414 ||||| || ||||| ||||| ||||| ||| | ||||| ||||| ||| Sbjct 1785 ATACAGAAGGAATCGACACTCCATTTGGTGCTTCGTCTTCGCGGAGGC 1738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422694808878400