Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq44371 118 9e-22 seq25273 91.5 1e-13 >seq44371 Length=3624 Score = 118 bits (130), Expect = 9e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 114170 CAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATC 114229 ||| |||| ||| | ||||||||| ||||||||||| ||||| || || || || Sbjct 1109 CAATACTAGATGCAACGTAGATTCCTTTTGAATGTTATAATCAGCCAAGGTTCGTCCGTC 1168 Query 114230 TTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289 ||| | |||||| |||||| | || | || || ||||| || ||||| ||||| ||||| Sbjct 1169 TTCCAATTGTTTGCCAGCGAAAATTAAGCGTTGCTGGTCAGGTGGAATTCCTTCCTTGTC 1228 Query 114290 GGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGT 114349 |||||| ||| | ||||||| || || | | ||| || || | || | || Sbjct 1229 TTGAATCTTAGCTTTAACATGTTCAATAGTATCCGAAGGTTCAACCTCAAGTGTGATGGT 1288 Query 114350 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||| || || |||||||| |||||||| ||||| Sbjct 1289 TTTACCCGTAAGAGTTTTAACAAAAATTTGCAT 1321 >seq25273 Length=2210 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| | | | || || || | ||||| || ||||| |||||||| ||| Sbjct 1964 ATACCACCACGCAAGCGGAGGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCG 2023 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | ||| |||||| | ||| || |||||| | || | ||| ||||| || || Sbjct 2024 GACAAGGCACGGCCATCTTCCAATTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGG 2083 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||||||||| || || || |||| | || | ||||| | ||| Sbjct 2084 GGAATGCCTTCTTTATCTTGGATTTTAGCCTTTACGTTCTCGATAGTGTCACATGGCTCG 2143 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | |||||||| |||| ||| || || || || ||||| Sbjct 2144 ACTTCCAAGGTGATGGTTTTGCCAGTCAAAGTCTTCACGAAGATTTGCAT 2193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419791579782624