Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_009821.1 Length=164270 Score E Sequences producing significant alignments: (Bits) Value seq66944 140 3e-28 >seq66944 Length=5658 Score = 140 bits (154), Expect = 3e-28 Identities = 325/485 (67%), Gaps = 15/485 (3%) Strand=Plus/Plus Query 135735 ACCTGCAACATCTG---GACTAAACAGAGTAATGTAA--TCCCGTTTAAGGAATCGCTCT 135789 ||||| ||||||| ||||||| |||||||| | |||| | || | |||| Sbjct 1451 ACCTGGCACATCTGACGGACTAAATAGAGTAATATCTCTTCCC--TGGAGTAGGCGCTGA 1508 Query 135790 ACCATCAGGTTATTAATCTGTACGCCGTAGTCAAGATGGCGAATGCGGTTATCTTCCACC 135849 |||||| ||||| | || || || ||||| | || |||| ||||||||||| || Sbjct 1509 TACATCAGTTTATTCAATTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACG 1568 Query 135850 CCCTTATTGTTCTTTAACACAATCAGACTTTCAAACTCTAAATGCCACATTGGGTAATAG 135909 || || ||||| || || | | |||||| | || || ||||| ||||| || | Sbjct 1569 CCACGGTTATTCTTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAAT 1628 Query 135910 AGAGTCGCCGCCCCGCCACGAATACCGCCTTGTGAGCATGACTTAACGGCAGTCTGAAAA 135969 || || || || || || || | ||| ||||| || || || ||||| || |||||||| Sbjct 1629 AGTGTTGCAGCACCACCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAG 1688 Query 135970 TGTTTCCAGAATGGGATAACGCCAGTATGACGAACTTCACCATGCCCGATCTTAGATCCT 136029 ||||| | ||||||||| || |||||| | |||| || | | ||| | ||| Sbjct 1689 TGTTTATAAAATGGGATACAACCCGTATGAAAAGCTTCGCCGTCACGTATCGAACTTCCC 1748 Query 136030 TCCGCGCGAATCATGCCAGCGTTGATACCGATACCAGCACGCTTGCTAATATACTTGATG 136089 || ||||| || || || || || |||||||| || | | || ||| || | Sbjct 1749 AAGGCACGAATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCACA 1808 Query 136090 ATTGCATTTGCTGTTTCGTTGATGCCCTGCAATGAGTC-ATCAC---TTTCAATCACCAC 136145 |||||| ||| ||| | || || | | ||| | ||||| ||||| | || Sbjct 1809 ATTGCACTTGAAGTTGCATTAAT----CGAATCGAGGCTATCACCGGACTCAATTAGTAC 1864 Query 136146 ACACGAACTAAATTGGCGTGTTGGGGTACGCACACCTGCCATAATCGGAGTAGGCAGAGA 136205 || ||||| || ||||| | || || || ||||| | ||| || || || |||| ||| Sbjct 1865 GCAGGAACTGAACTGGCGAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGA 1924 Query 136206 GATTT 136210 |||| Sbjct 1925 AATTT 1929 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/162 (72%), Gaps = 4/162 (2%) Strand=Plus/Plus Query 134881 CCTTCTTTCGATCCTTTAA--CCGATACAATCCCGCGAGGCGGTTCAATACCGTTTGTGC 134938 || ||||| ||| |||||| | |||| | || ||||| ||||||||||| || || Sbjct 591 CCATCTTTTGATGCTTTAATGCTGATATGA--CCACGAGGTGGTTCAATACCATTGGTCG 648 Query 134939 TGTTAGATACCTGAGAAGACGACTCACAAGGCATCAGAGCCGAAAGCGTACTATTACGAA 134998 |||||||| ||| || || | ||| |||||||||| || || || ||| ||||| | Sbjct 649 CGTTAGATATCTGCGATGATGTTTCAGAAGGCATCAGTGCAGATAGAGTAGAGTTACGTA 708 Query 134999 TGCCATATTTTTTCAGGTCTTCGCGCAGTTCTTCCCAATCCA 135040 || || ||| | |||||| ||||||||||| |||| Sbjct 709 GACCGTAGACTTTAATTGATTCGCGTAGTTCTTCCCAGTCCA 750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 525096178921600