Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq25273 122 9e-23 seq44371 118 1e-21 >seq25273 Length=2210 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||| | | |||||| | ||| | |||||||| || || ||||| || || || Sbjct 1739 CCTCCGCGAAGACGAAGCACCAAATGGAGTGTCGATTCCTTCTGTATGTTATAGTCGGCT 1798 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || |||| || ||||||||||| ||| | || | || ||||| || |||||| Sbjct 1799 AGAGTACGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGAGGA 1858 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || ||||| || || ||||||| || | ||||| | || ||| Sbjct 1859 ATACCCTCCTTATCTTGGATCTTGGCCTTTACATTTTCAATAGTATCGGATGGCTCAACT 1918 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| ||| | |||||||| ||||| || || || ||||||||||| Sbjct 1919 TCTAAAGTGATAGTCTTGCCTGTCAATGTCTTGACAAAAATTTGCAT 1965 >seq44371 Length=3624 Score = 118 bits (130), Expect = 1e-21 Identities = 155/212 (73%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 |||||||| | ||| ||||| ||||||||||| ||||| || | ||| || ||||||| Sbjct 1113 ACTAGATGCAACGTAGATTCCTTTTGAATGTTATAATCAGCCAAGGTTCGTCCGTCTTCC 1172 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 | || ||||| || |||| | || |||||||| || ||||||||||| || ||||| Sbjct 1173 AATTGTTTGCCAGCGAAAATTAAGCGTTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTG- 1231 Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 | | || ||||| ||| || | ||||| | || || || | || | ||| || Sbjct 1232 AATCTTAGCTTTAACATGTTCAATAGTATCCGAAGGTTCAACCTCAAGTGTGATGGTTTT 1291 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCATTT 64445 || || | |||||| || ||||||||||||| Sbjct 1292 ACCCGTAAGAGTTTTAACAAAAATTTGCATTT 1323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499226647266880