Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_011357.1 Length=62147 Score E Sequences producing significant alignments: (Bits) Value seq66716 233 8e-57 >seq66716 Length=2253 Score = 233 bits (258), Expect = 8e-57 Identities = 428/625 (68%), Gaps = 4/625 (1%) Strand=Plus/Plus Query 58 TTTGTGTTTATTACGATGGGTAAAGAGATAATCAAACAGGCGTGGTTGACGCGTTTTTAC 117 ||| || ||| |||||| |||| | | |||| | | || || || | |||| || Sbjct 76 TTTATGCTTACGACGATGCCTAAATAAAAAATCGTATAATCGAGGCTGTTTCTTTTTAAC 135 Query 118 CAGTTTCGCCATCGCAATAGTGGCGTACACATCAGCCATCGCATCGTGGGCGTTGCTATG 177 ||||| ||||| || || ||||| || ||||| | || ||||||||||||| ||| Sbjct 136 TAGTTTTGCCATAGCTATGGTGGCATAAACATCTGAGATAGCATCGTGGGCGTGATCATG 195 Query 178 TTCAATACCATTCGCTTTGGTTAAATGCTCAAGGCGAAAGCTCGGTAGACCGTCATCATT 237 ||| | |||||| | | || |||| || | || || | || ||| |||||||| Sbjct 196 TTCCACACCATTATTTCTAGTCAAATTATCTAAACGGAAATTTGGAGAACCATCATCATT 255 Query 238 TTCAGGCCAGTTTATTCCTTCCGGGCGCAGGGCATAGCAGGCACGCATAACATCCAGTAA 297 || ||||| | || || || ||||| || || ||||||| ||||||||| | ||||| Sbjct 256 TTTTGGCCATGTAATACCGTCTGGGCGTAGAGCGTAGCAGGTACGCATAACGTTTAGTAA 315 Query 298 ATCCCAGCGCGAGTTATCATGCTGCCAGCTCCAGGCGTAAGGATCGTAGAAATTACGATA 357 ||||||||| ||| |||| ||||| ||||| || |||||||| || ||||| ||||| Sbjct 316 ATCCCAGCGACTATTACCATGTTGCCAACTCCATGCATAAGGATCATAAAAATTGCGATA 375 Query 358 AAAAACGTTGCGTGTGACTTCGTCGTCGAAACGCACATTGTTGTAGCCCAGAATACAGGT 417 ||| | || || | || || || || |||| | || || || |||| ||| ||||| Sbjct 376 AAATAAATTACGGCTCACCTCATCATCAAAACATAAGTTATTATAACCCACAATGCAGGT 435 Query 418 CTTCGG--TACGGTAAAAAGCGAGTGAATACGGGCGGCAAATGCGGCTTCGTTTTCTCCT 475 || || ||| | | ||| ||| ||||| | || || ||||||| || Sbjct 436 ATTAGGTTTACTGAATAAA--TTGTGGATACGTCGTGTGAAGTCGACTTCGTTAATCCCG 493 Query 476 TTCGCCCGAGCTTCCTGCGGGGTAATACCGGTAATTAATACTGCTCCAGGCTGGGGTAAA 535 || | || ||| || |||||||| || || | || ||| | || || |||| Sbjct 494 CGTGCATGTGCAATCTGTGGAGTAATACCTGTGATCATAACAGCTTCGGGTTGCGGTAGG 553 Query 536 TAGTCATCCGCGGGCTTGCAGTAAAAGACTTCGGGTTCGCCGATGACATTGAATTCGTCA 595 || ||||| || ||||| |||||||| | ||| || || | || | ||| || || | Sbjct 554 TAATCATCTGCCGGCTTACAGTAAAAAATTTCTGGCTCATCTATAATATTAAAATCCATA 613 Query 596 TCGGTGCGAATGGCTGCGAACTGTGCAGGGCGATCTAACGCGGGGTGCGTGCCAAAGGTT 655 || || |||| | || || ||||| || || || | | || ||||||| ||| Sbjct 614 TCAGTACGAACACCAGCAAATTGTGCTGGACGGTCGAGAGATGGACTTTTGCCAAAAGTT 673 Query 656 TCGTAATCGTGAAAGAGGAAGGTAG 680 || ||||| ||||| || ||||||| Sbjct 674 TCATAATCATGAAAAAGAAAGGTAG 698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198590783772816