Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq44371 143 2e-29 seq25273 116 3e-21 >seq44371 Length=3624 Score = 143 bits (158), Expect = 2e-29 Identities = 161/213 (76%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGCGTC 15023 || |||| ||| | ||||| || ||||| ||||| ||||| || || | || |||| Sbjct 1110 AATACTAGATGCAACGTAGATTCCTTTTGAATGTTATAATCAGCCAAGGTTCGTC-CGTC 1168 Query 15024 TTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTC 15083 ||| ||||||||||||||| | || || || || ||||| |||||||||||||||||| Sbjct 1169 TTCCAATTGTTTGCCAGCGAAAATTAAGCGTTGCTGGTCAGGTGGAATTCCTTCCTTGTC 1228 Query 15084 ACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGT 15143 ||| || ||| ||| ||| |||||||| | ||| || || | || ||||| Sbjct 1229 TTGAATCTTAGCTTTAACATGTTCAATAGTATCCGAAGGTTCAACCTCAAGTGTGATGGT 1288 Query 15144 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 |||||| || |||||||| |||||||||||||| Sbjct 1289 TTTACCCGTAAGAGTTTTAACAAAAATTTGCAT 1321 >seq25273 Length=2210 Score = 116 bits (128), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| ||||| | | || || ||||||||||| || ||||| |||||||| ||| | Sbjct 1967 CCACCACGCAAGCGGAGGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCG--G 2024 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | || | || | ||||| ||||| ||||||||| | || ||||| ||||| || | Sbjct 2025 ACAAGGCACGGCCATCTTCCAATTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGGG 2084 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| ||||| || || ||||| ||||| | || ||||| || | || | Sbjct 2085 GAATGCCTTCTTTATCTTGGATTTTAGCCTTTACGTTCTCGATAGTGTCACATGGCTCGA 2144 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | || ||||| |||||||| || |||| ||| || || || ||||||||| Sbjct 2145 CTTCCAAGGTGATGGTTTTGCCAGTCAAAGTCTTCACGAAGATTTGCATA 2194 Score = 95.1 bits (104), Expect = 9e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || ||||| || || || || || |||||||| || ||| ||| | | |||| || Sbjct 1757 ACCAAATGGAGTGTCGATTCCTTCTGTATGTTATAGTCGGCTAGAGTACGTCCGTCCTCC 1816 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || |||||||| | || ||||| || || || ||||| || ||||| || Sbjct 1817 AGCTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGAGGAATACCCTCCTTATCTTGG 1876 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||| |||||| |||| ||||||||| || || ||||| || || || || Sbjct 1877 ATCTTGGCCTTTACATTTTCAATAGTATCGGATGGCTCAACTTCTAAAGTGATAGTCTTG 1936 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||||| || || ||||||||||||||| Sbjct 1937 CCTGTCAATGTCTTGACAAAAATTTGCATA 1966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357100376169320