Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq44371 147 2e-30 seq44017 104 2e-17 seq25273 95.1 1e-14 >seq44371 Length=3624 Score = 147 bits (162), Expect = 2e-30 Identities = 180/246 (73%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 45113 TCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCT 45172 |||||| | ||| | ||| |||||||||| ||| ||||||||||| || |||||||| Sbjct 1094 TCCTCCTCTGAGACGCAATACTAGATGCAACGTAGATTCCTTTTGAATGTTATAATCAGC 1153 Query 45173 GACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGG 45232 | |||| || ||||||||||| || ||| | || || ||||||||||| || || Sbjct 1154 CAAGGTTCGTCCGTCTTCCAATTGTTTGCCAGCGAAAATTAAGCGTTGCTGGTCAGGTGG 1213 Query 45233 AATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGAC 45292 ||| ||||| || |||||||| || ||| | ||| | || || |||| || || Sbjct 1214 AATTCCTTCCTTGTCTTGAATCTTAGCTTTAACATGTTCAATAGTATCCGAAGGTTCAAC 1273 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGACCAAT 45352 || || || | ||||| || || |||||||| |||||||||||||| | ||| | | Sbjct 1274 CTCAAGTGTGATGGTTTTACCCGTAAGAGTTTTAACAAAAATTTGCATTTCTGGACAATT 1333 Query 45353 TTAATA 45358 ||||| Sbjct 1334 CTAATA 1339 >seq44017 Length=1387 Score = 104 bits (114), Expect = 2e-17 Identities = 169/235 (72%), Gaps = 10/235 (4%) Strand=Plus/Plus Query 124441 AACTGTACAAAACCGTGTGGGAAATGAAAAATAAACGATTA-ATTGAA-ATGGCCGTCGA 124498 |||| ||||| || ||||||||||| | | || || || | |||| ||||||| || Sbjct 212 AACTTTACAAGACTGTGTGGGAAAT-ATCGGTGAA-GACTACAATGAAGATGGCCGCTGA 269 Query 124499 CCGAGGCGCGTACACGGATCAAAGTCAATCTTTTAACGTGTTTGTAGCGGAACCCACCTA 124558 || ||||||| | |||||||||||||| ||||| | |||||| ||||| | ||| Sbjct 270 TCGTGGCGCGTTTATTGATCAAAGTCAATCGTTTAATATACATGTAGCTGAACCAAACTA 329 Query 124559 CGCCCGCATG--ACCAGC-ATACACATGCACGCGTGGAGCAGCGGACTCAAAACGGGCAT 124615 | ||| | | || | ||||| | | | |||| || |||||||| ||||| Sbjct 330 TG---GCAAGCTAACATCTATACATTTTTATGGTTGGAAGGCGGGTCTCAAAACTGGCAT 386 Query 124616 GTATTACTTAAGAACCAAACCGGCGGCCGATGCCATTCAATTTACCGTCGACAAA 124670 |||||| ||| | ||||||||||| || |||| || |||||||| || || ||| Sbjct 387 GTATTATTTACGTACCAAACCGGCTGCAAATGCTATACAATTTACAGTTGATAAA 441 >seq25273 Length=2210 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || ||||||||||| || || ||| | || ||| |||||||| Sbjct 1991 TGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGGACAAGGCACGGCCATCTTCCAATTGC 2050 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | || || ||||| || || || |||||||||||||||||||| ||||| Sbjct 2051 TTGCCAGCGAAAATTAAACGTTGTTGATCTGGGGGAATGCCTTCTTTATCTTGGATTTTA 2110 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 || | || | || | ||||| | | ||||||||| | || | |||||||| || Sbjct 2111 GCCTTTA-CGTTCTCGATAGTGTCACATGGCTCGACTTCCAAGGTGATGGTTTTGCCAGT 2169 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 | ||| || || || |||||||| Sbjct 2170 CAAAGTCTTCACGAAGATTTGCAT 2193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451624918521920