Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_012740.1 Length=166418 Score E Sequences producing significant alignments: (Bits) Value seq66944 127 2e-24 >seq66944 Length=5658 Score = 127 bits (140), Expect = 2e-24 Identities = 318/478 (67%), Gaps = 15/478 (3%) Strand=Plus/Plus Query 139628 ACATCTG---GACTAAACAGAGTAATGTAA--TCCCGTTTAAGGAATCGCTCTACCATCA 139682 ||||||| ||||||| |||||||| | |||| | || | |||| ||||| Sbjct 1458 ACATCTGACGGACTAAATAGAGTAATATCTCTTCCC--TGGAGTAGGCGCTGATACATCA 1515 Query 139683 GGTTATTAATCTGTACGCCGTAATCAAGATGACGAATGCGGTTATCTTCCACCCCCTTAT 139742 | ||||| | || || || || || | ||||||| ||||||||||| || || | Sbjct 1516 GTTTATTCAATTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCCACGGT 1575 Query 139743 TGTTCTTTAACACAATCAGACTTTCAAACTCTAAATGCCATATTGGGTAATAGAGAGTCG 139802 | ||||| || || | | |||||| | || || ||||||||||| || | || || | Sbjct 1576 TATTCTTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAGTGTTG 1635 Query 139803 CCGCCCCGCCACGAATGCCGCCTTGTGAGCATGACTTAACGGCCGTCTGAAAATGTTTCC 139862 | || || || || | || ||||| || || || ||||| || |||||||| ||||| Sbjct 1636 CAGCACCACCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTGTTTAT 1695 Query 139863 AGAATGGGATAACGCCAGTATGACGAACTTCACCATGCCCGATCTTAGATCCTTCCGCGC 139922 | ||||||||| || |||||| | |||| || | | ||| | ||| || | Sbjct 1696 AAAATGGGATACAACCCGTATGAAAAGCTTCGCCGTCACGTATCGAACTTCCCAAGGCAC 1755 Query 139923 GAATCATGCCAGCGTTGATACCGATACCAGCACGCTTGCTAATATACTTGATGATTGCAT 139982 |||| || || || || || |||||||| || | | || ||| || | |||||| Sbjct 1756 GAATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCACAATTGCAC 1815 Query 139983 TTGCTGTTTCGTTGATGCCCTGCAATGAGTC-ATCAC---TTTCGATCACCACACACGAA 140038 ||| ||| | || || | | ||| | ||||| || || | || || ||| Sbjct 1816 TTGAAGTTGCATTAAT----CGAATCGAGGCTATCACCGGACTCAATTAGTACGCAGGAA 1871 Query 140039 CTAAATTGGCGTGTTGGGGTACGCACACCTGCCATAATCGGAGTAGGTAGAGAGATTT 140096 || || ||||| | || || || ||||| | ||| || || || || | ||| |||| Sbjct 1872 CTGAACTGGCGAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGAAATTT 1929 Score = 89.7 bits (98), Expect = 5e-13 Identities = 118/162 (73%), Gaps = 4/162 (2%) Strand=Plus/Plus Query 138767 CCTTCTTTCGATCCTTTAA--CCGATACAATCCCGCGAGGCGGTTCAATACCGTTTGTGC 138824 || ||||| ||| |||||| | |||| | || ||||| ||||||||||| || || Sbjct 591 CCATCTTTTGATGCTTTAATGCTGATATGA--CCACGAGGTGGTTCAATACCATTGGTCG 648 Query 138825 TGTTAGATACCTGAGAAGACGACTCACAAGGCATCAGCGCCGACAGTGTACTGTTACGAA 138884 |||||||| ||| || || | ||| |||||||||| || || || ||| |||||| | Sbjct 649 CGTTAGATATCTGCGATGATGTTTCAGAAGGCATCAGTGCAGATAGAGTAGAGTTACGTA 708 Query 138885 TGCCATATTTTTTCAGGTCTTCGCGCAGTTCTTCCCAATCCA 138926 || || ||| | |||||| ||||||||||| |||| Sbjct 709 GACCGTAGACTTTAATTGATTCGCGTAGTTCTTCCCAGTCCA 750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531964026405760