Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq44371 107 5e-18 seq25273 107 5e-18 >seq44371 Length=3624 Score = 107 bits (118), Expect = 5e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || || |||||||| | ||| || |||||||| || | ||| ||||||| || || || Sbjct 1125 GTAGATTCCTTTTGAATGTTATAATCAGCCAAGGTTCGTCCGTCTTCCAATTGTTTGCCA 1184 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 ||||| || | || |||||||| || ||||||||| || |||||||| || Sbjct 1185 GCGAAAATTAAGCGTTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGAATCTTAGCTTTA 1244 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 || ||| | || || | | ||| || || | ||||| || |||||||| |||||| Sbjct 1245 ACATGTTCAATAGTATCCGAAGGTTCAACCTCAAGTGTGATGGTTTTACCCGTAAGAGTT 1304 Query 199613 TTCACAAAAATTTG 199626 || ||||||||||| Sbjct 1305 TTAACAAAAATTTG 1318 >seq25273 Length=2210 Score = 107 bits (118), Expect = 5e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || || ||||||||||||| ||||||||| | ||| | | |||||| Sbjct 1982 AGGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGGACAAGGCACGGCCATCT 2041 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| ||||| || ||||| || | ||| || || || || ||| |||||| || Sbjct 2042 TCCAATTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGGGGAATGCCTTCTTTATCT 2101 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || ||| ||| |||| ||||| || || || ||||| ||||| || Sbjct 2102 TGGATTTTAGCCTTTACGTTCTCGATAGTGTCACATGGCTCGACTTCCAAGGTGATGGTT 2161 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | ||| ||||| || ||||| Sbjct 2162 TTGCCAGTCAAAGTCTTCACGAAGATTTG 2190 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||||| ||||| ||||| || | ||| ||||| || | ||| Sbjct 1745 CGAAGACGAAGCACCAAATGGAGTGTCGATTCCTTCTGTATGTTATAGTCGGCTAGAGTA 1804 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||| || ||||||||||| || || ||||| | ||| ||||| || ||| ||| || Sbjct 1805 CGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGAGGAATACCC 1864 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| ||| || ||| | || || | || || || || || Sbjct 1865 TCCTTATCTTGGATCTTGGCCTTTACATTTTCAATAGTATCGGATGGCTCAACTTCTAAA 1924 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || | || || ||||||||||| Sbjct 1925 GTGATAGTCTTGCCTGTCAATGTCTTGACAAAAATTTG 1962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177910294525784