Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq25273 87.8 2e-12 >seq25273 Length=2210 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 |||||| | | ||| | ||||| ||| | ||| ||||| || || || ||||||| Sbjct 1738 GCCTCCGCGAAGACGAAGCACCAAATGGAGTGTCGATTCCTTCTGTATGTTATAGTCGGC 1797 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 |||||| || |||| || ||||||||||| || || || || || ||||| || | || Sbjct 1798 TAGAGTACGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGAGG 1857 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | | |||||| || |||||| ||| | | | | || ||| | || || Sbjct 1858 AATACCCTCCTTATCTTGGATCTTGGCCTTTACATTTTCAATAGTATCGGATGGCTCAAC 1917 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||||| || ||||| |||| || || ||||| |||||||| Sbjct 1918 TTCTAAAGTGATAGTCTTGCCTGTCAATGTCTTGACAAAAATTTGCAT 1965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564765351983040