Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq25273 111 2e-19 seq44371 107 2e-18 >seq25273 Length=2210 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | || ||||||||||||||| | || |||||| | Sbjct 2193 ATGCAAATCTTCGTGAAGACTTTGACTGGCAAAACCATCACCTTGGAAGTCGAGCCATGT 2134 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | ||||||| || ||||| || |||||| | || || Sbjct 2133 GACACTATCGAGAACG-TAAAGGCTAAAATCCAAGATAAAGAAGGCATTCCCCCAGATCA 2075 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | |||| ||| ||||| || |||| || | || || | ||||||||| Sbjct 2074 ACAACGTTTAATTTTCGCTGGCAAGCAATTGGAAGATGGCCGTGCCTTGTCCGACTACAA 2015 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||| | || || || ||||| || || ||| | || || Sbjct 2014 CATCCAAAAGGAGTCTACCCTTCACTTGGTCCTCCGCTTGCGTGGTGG 1967 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || | || ||||| || ||||| | || || ||| | || Sbjct 1965 ATGCAAATTTTTGTCAAGACATTGACAGGCAAGACTATCACTTTAGAAGTTGAGCCATCC 1906 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | ||| | || | || |||| || || ||||| ||||| | || || Sbjct 1905 GATACTATTGAAAATGTAAAGGCCAAGATCCAAGATAAGGAGGGTATTCCTCCAGATCAG 1846 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || | || | || ||||| |||||||| |||| || || || |||||| ||| Sbjct 1845 CAACGTTTAATCTTTGCTGGCAAGCAGCTGGAGGACGGACGTACTCTAGCCGACTATAAC 1786 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || || |||||| |||| || ||||||||||| ||| Sbjct 1785 ATACAGAAGGAATCGACACTCCATTTGGTGCTTCGT 1750 >seq44371 Length=3624 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38242 AAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCA 38301 |||||||||| || || ||||| || ||||| ||||||||||| | || || || | Sbjct 1323 AAATGCAAATTTTTGTTAAAACTCTTACGGGTAAAACCATCACACTTGAGGTTGAACCTT 1264 Query 38302 CCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 | || | | || |||||| || || | ||||| || |||||||| | |||| Sbjct 1263 CGGATACTATTGAACATGTTAAAGCTAAGATTCAAGACAAGGAAGGAATTCCACCTGACC 1204 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || | |||| ||| |||||||| |||| |||| || ||| | || || | Sbjct 1203 AGCAACGCTTAATTTTCGCTGGCAAACAATTGGAAGACGGACGAACCTTGGCTGATTATA 1144 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||| ||||||||| | ||| ||||| | || ||||| | ||||| || Sbjct 1143 ACATTCAAAAGGAATCTACGTTGCATCTAGTATTGCGTCTCAGAGGAGG 1095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499754205383680