Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_014467.1 Length=176788 Score E Sequences producing significant alignments: (Bits) Value seq66944 217 2e-51 seq66733 86.0 7e-12 >seq66944 Length=5658 Score = 217 bits (240), Expect = 2e-51 Identities = 325/459 (71%), Gaps = 12/459 (3%) Strand=Plus/Minus Query 41109 CTTCTATAACGCAATTTCGGATCGTAAACTGTCATTACCTACGCCTATTATGGCGGGTGT 41168 |||||| | || ||||| | |||| | || || || || || || ||| | ||||| Sbjct 1955 CTTCTACGATGCTATTTCAACTTTTAAAATTTCTTTGCCCACACCAATCATGTCCGGTGT 1896 Query 41169 GCGTACTCCTACGCGTCAGTTCTCCAGTT---GTGTTGTAATCGAATCTGGTGATTCTCT 41225 || || |||| || |||||| |||| | || |||| || || |||||| || Sbjct 1895 ACGCACACCTATTCGCCAGTTC---AGTTCCTGCGTACTAATTGAGTCCGGTGATAGCCT 1839 Query 41226 GGGTTCTCTGAACGCTGTTACGTCCGCGATCGTGAAATATATCTCTCAACGTGCGGGTAT 41285 | ||| | || || | | || || ||||||||| | || ||||| || ||||| Sbjct 1838 CGATTCGATTAATGCAACTTCAAGTGCAATTGTGAAATATGTTTCCCAACGGGCTGGTAT 1779 Query 41286 CGGTGTCAACGCCGGACACATTCGCGCTATGGG---TTCAAAAATCCGTGGTGGTGAAGC 41342 || | || ||||| | ||||| || |||| ||| | | |||| || ||||| Sbjct 1778 TGGCATTAATGCCGGTCGAATTCGTGCCTTGGGAAGTTCGATA---CGTGACGGCGAAGC 1722 Query 41343 AGTCCATACAGGCGTTATCCCGTTCTGGAAACACATTCAGACGGCGGTTAAATCTTGTTC 41402 | ||||| || |||||| || | |||||| ||||||| || |||||||||||||| Sbjct 1721 TTTTCATACGGGTTGTATCCCATTTTATAAACACTTTCAGACCGCAGTTAAATCTTGTTC 1662 Query 41403 CCAGGGTGGCGTTCGTGGTGGTGCAGCAACCCTGTATTATCCGATCTGGCATCTTGAAGT 41462 || ||||| || || |||||||| ||||| || | ||||| || ||||| | ||||| Sbjct 1661 TCAAGGTGGTGTACGCGGTGGTGCTGCAACACTATTCTATCCAATATGGCACTTGGAAGT 1602 Query 41463 TGAAAACCTGCTGGTTCTGAAAAATAACCGTGGCGTTGAAGAAAACCGTATTCGTCACCT 41522 |||| | ||||| |||| |||||||||||||| ||||| |||||| |||||||| | Sbjct 1601 GGAAAGTTTACTGGTCTTGAAGAATAACCGTGGCGTAGAAGATAACCGTGTTCGTCACAT 1542 Query 41523 GGACTATGGCGTACAGCTTAACGATTTGATGTATAAGCG 41561 ||||||||| || || | || | |||||||| |||| Sbjct 1541 GGACTATGGTGTTCAATTGAATAAACTGATGTATCAGCG 1503 >seq66733 Length=2293 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 49778 TCCGGCCCTTTAGCTTAATTGGTTAGAGCGGGTGACTCATAATCGCGCGGTTGCTGGTTC 49837 || ||||| ||||| | |||||||||| ||||||||||||||| ||| |||||||| Sbjct 549 TCTGGCCCCATAGCTCAGACGGTTAGAGCGTGTGACTCATAATCGCTTGGTCGCTGGTTC 608 Query 49838 GAATCCAGCAGGGGCCACCAAA 49859 | |||||| |||||||||||| Sbjct 609 AAGTCCAGCTGGGGCCACCAAA 630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565120254716160