Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_014595.1 Length=170605 Score E Sequences producing significant alignments: (Bits) Value seq66944 179 4e-40 >seq66944 Length=5658 Score = 179 bits (198), Expect = 4e-40 Identities = 292/419 (70%), Gaps = 6/419 (1%) Strand=Plus/Plus Query 142924 CATCAGGTTATTCAGCTGGACACCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCC 142983 |||||| ||||||| || |||||||||||||| || | | ||||| ||||| ||||| Sbjct 1511 CATCAGTTTATTCAATTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCC 1570 Query 142984 CTTGTTGTTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 143043 ||| ||||||| || |||||| |||| |||||||| ||||| || ||||| | Sbjct 1571 ACGGTTATTCTTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAG 1630 Query 143044 AGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCCGTTTGGAAATG 143103 || ||||| || || || | |||||||| ||||| |||||||| || || || || || Sbjct 1631 TGTTGCAGCACCACCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTG 1690 Query 143104 TTTCCAGAACGGAATAACACCAGTATGCTTAACTTCGCCCATACCGATTTTCGAACCTTC 143163 ||| | || || ||| ||| ||||| | ||||||| || | |||||| | | Sbjct 1691 TTTATAAAATGGGATACAACCCGTATGAAAAGCTTCGCCGTCAC---GTATCGAACTTCC 1747 Query 143164 ---GGCACGAATCATGCCAACGTTGATACCGATACCTGCACGCTTACTGATATATTCGAT 143220 ||||||||| || | || || || ||||| || || | | ||||| | Sbjct 1748 CAAGGCACGAATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCAC 1807 Query 143221 GATTGAATTAGCAGTCTTATTAATTGACTTCAGGGAGTCAGCCGCTTCGATAACCACGCA 143280 |||| | | | ||| |||||| || | ||| ||| | | || || | ||||| Sbjct 1808 AATTGCACTTGAAGTTGCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTACGCA 1867 Query 143281 GGAACTGAACTGTCTGGTAGGTGTTCTGGCGCCGGCCATGATAGGCGTGGGCAACGAAA 143339 |||||||||||| | ||||||| | | |||| |||||| || |||||||| |||| Sbjct 1868 GGAACTGAACTGGCGAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGAAA 1926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545351213284800