Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_014636.1 Length=225268 Score E Sequences producing significant alignments: (Bits) Value seq66944 165 1e-35 seq66611 91.5 2e-13 >seq66944 Length=5658 Score = 165 bits (182), Expect = 1e-35 Identities = 271/391 (69%), Gaps = 0/391 (0%) Strand=Plus/Plus Query 129056 ACATCAGCTTATTGATTTGGATACCGTAGTCAAGATGTCGGATTCGGTTTTCTTCAACGC 129115 ||||||| ||||| | ||| | ||| ||||| | || || | ||||| ||||| |||| Sbjct 1510 ACATCAGTTTATTCAATTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGC 1569 Query 129116 CCTTGTTATTCTTGAGCACAAGGATTTTTTCAACTTCGAGGTGCCACATTGGGTAATATA 129175 | ||||||||| | || || | |||| ||||| | |||||| ||||| || ||| Sbjct 1570 CACGGTTATTCTTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATA 1629 Query 129176 GAGTTGCGGCACCGCCGCGAACACCACCCTGTGAACAGCTCTTTACCGCAGTCTGGAAGT 129235 | ||||| ||||| ||||| |||||||| || ||||| || || || ||||| |||| Sbjct 1630 GTGTTGCAGCACCACCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGT 1689 Query 129236 ATTTCCAAAATGGGATAATACCGGTATGTCGCACTTCACCGCTACGAATGCGAGATCCCT 129295 ||| ||||||||||| ||| ||||| |||| ||| ||| || | |||| Sbjct 1690 GTTTATAAAATGGGATACAACCCGTATGAAAAGCTTCGCCGTCACGTATCGAACTTCCCA 1749 Query 129296 CGGCACGAATCGCACCGCCGTTGATGCCGATACCAGCGCGTTTGCTGATATAGTCAACGA 129355 ||||||||| |||| | || ||||| |||||||| |||| | | ||| | || | Sbjct 1750 AGGCACGAATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCACAA 1809 Query 129356 TAGAACTAGCGGTAGCGTTGATGCTATCCAGTTCGTCTCCACATTCGATCTTGACACAAG 129415 | | ||| | || || || || ||| || || || | || || || || | Sbjct 1810 TTGCACTTGAAGTTGCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTACGCAGG 1869 Query 129416 AGCTAAACTGCCGAGTCGGGGTGCGAACACC 129446 | || ||||| ||| | || ||||| ||||| Sbjct 1870 AACTGAACTGGCGAATAGGTGTGCGTACACC 1900 >seq66611 Length=1920 Score = 91.5 bits (100), Expect = 2e-13 Identities = 136/191 (71%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 126995 TTTAGCAATATCAACCATTTCTGGGTCATCTTCGCCGTT--TTGCCAAGTGCGAATTTGA 127052 ||| ||||| | | ||||||| || ||||||||||| | | |||| || | | Sbjct 1660 TTTGGCAATTTTAGCCATTTCCGGATCATCTTCGCCACTACGTAGTAAGTTTAAAAT--A 1717 Query 127053 TACTGGGTGCCTTTGAGGTGCAATTGTTCATCACGCGCAATCAGTTTCATGATCTTAGCG 127112 | ||| || || | | ||| || ||| ||||| ||||| ||||| || || ||||| Sbjct 1718 TGCTGAGTTCCGGTTAAGTGTAACGCTTCGTCACGGGCAATAAGTTTAATTATTTTAGCA 1777 Query 127113 TTGCCTTCCATCAAACCGCGTTCGGCAAACGAGAAGGTGCAGGCGAAGCTTACATAAAAA 127172 || |||||||| | | || || ||||| | ||| | ||||| || ||||| |||||| Sbjct 1778 TTACCTTCCATAAGTTCACGCTCTGCAAAAGCGAAAGAACAGGCAAAACTTACGTAAAAA 1837 Query 127173 CGAATCGCTTC 127183 || |||||||| Sbjct 1838 CGTATCGCTTC 1848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720126421397760