Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq44371 178 5e-39 seq66578 120 1e-21 seq25273 116 1e-20 seq25963 111 6e-19 >seq44371 Length=3624 Score = 178 bits (196), Expect = 5e-39 Identities = 175/226 (77%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| |||||||| || || |||||||| || || ||||| |||||| | || Sbjct 1322 AATGCAAATTTTTGTTAAAACTCTTACGGGTAAAACCATCACACTTGAGGTTGAACCTTC 1263 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| |||||| | ||||| || |||||||| |||||||||||||| ||||| || Sbjct 1262 GGATACTATTGAACATGTTAAAGCTAAGATTCAAGACAAGGAAGGAATTCCACCTGACCA 1203 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||||| ||||||||| | || |||||| | ||||| ||| |||| ||||| |||||||| Sbjct 1202 GCAACGCTTAATTTTCGCTGGCAAACAATTGGAAGACGGACGAACCTTGGCTGATTATAA 1143 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 ||| | ||||| | || | || ||||||| | || |||||| Sbjct 1142 CATTCAAAAGGAATCTACGTTGCATCTAGTATTGCGTCTCAGAGGA 1097 >seq66578 Length=1850 Score = 120 bits (132), Expect = 1e-21 Identities = 414/639 (65%), Gaps = 14/639 (2%) Strand=Plus/Minus Query 451896 ATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTT 451955 ||||||||||| | || || || || ||||| ||||| ||| | ||| | | |||| Sbjct 1615 ATGAAATTGTGTTAGTCGGTGGATCAACACGTATTCCCAAAGTACAACAACT--TGTCAA 1558 Query 451956 ---CTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCAT 452012 ||| ||| | ||| ||| || | || | || || ||||||||||| |||| Sbjct 1557 AGACTTCTTTAATAATAAAG-AACCATCTCGTGGCATTAACCCCGATGAAGCTGTCGCAT 1499 Query 452013 ATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGGAGATA 452072 |||||||||| || ||||| | | | || | ||| | | ||| | | || | || Sbjct 1498 ATGGTGCTGCTGTACAAGCCGGTGTACTTTCTGGTGAACAAGAT-ACAGAT-----GCTA 1445 Query 452073 TTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGA 452132 || | ||| | ||||| | || | || | || ||||||| | ||||| |||||| Sbjct 1444 TTGTTTTACTTGATGTCAATCCATTGACTATGGGCATTGAAACTGTGGGTGGTGTGATGA 1385 Query 452133 CTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAG 452192 | || || ||| ||| || ||| || || || |||| || ||| | Sbjct 1384 CAAAATTGATTCCACGTAACACCGTTATCCCAACGAAGAAATCGCAAATCTTCTCTACTG 1325 Query 452193 CAAGTGATAACCAAC-CAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACA 452251 | || ||||| | || | ||||| |||||||| | |||||| ||||| ||||||| Sbjct 1324 CTTCCGACAACCAGCACACG-GTAACCATTCAAGTTTATGAAGGTGAACGCCCAATGACC 1266 Query 452252 CGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGA 452311 |||||| || || || |||| | | | ||||| || ||| | || Sbjct 1265 AAAGATAACCATTTGCTTGGCAAATTCGATTTGACTGGTATTCCACCAGCGCCTCGTGGT 1206 Query 452312 ACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCA 452371 | || ||||||||| | ||| ||| | || || |||||||||||| | |||||||| Sbjct 1205 ATGCCACAAATTGAAGTGTCCTTTGAAATCGACGCTAATGGTATTCTTCAAGTGAGTGCT 1146 Query 452372 GTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTA 452431 | || || | | || || ||||| ||| ||||| |||||| | || || ||| Sbjct 1145 GAAGACAAGGGAACGGGCAACAAGGAAAAGATTGTTATTACAAATGATCAGAATCGGTTA 1086 Query 452432 TCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGAA 452491 || |||||||||||| ||| | ||| || ||||| || ||||| || | Sbjct 1085 ACTCCAGAAGATATTGATCGTATGATTCGTGATGCCGAAAAGTTTGCTGATGAGGACAAG 1026 Query 452492 CAAGTTAGAAAACATGTTGAAGCTAAAAACAAACTAGAA 452530 || | | | || | |||||| || ||| |||| ||| Sbjct 1025 AAATTGAAAGAAAAGGTTGAAACTCGCAACGAACTGGAA 987 >seq25273 Length=2210 Score = 116 bits (128), Expect = 1e-20 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || ||| |||| || || ||||| ||| | || ||||| |||| Sbjct 1965 ATGCAAATTTTTGTCAAGACATTGACAGGCAAGACTATCACTTTAGAAGTTGAGCCATCC 1906 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | | || || || ||||||||||| || |||||||| ||||| Sbjct 1905 GATACTATTGAAAATGTAAAGGCCAAGATCCAAGATAAGGAGGGTATTCCTCCAGATCAG 1846 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||||||||| || | || || || || || || ||| | ||| | || || ||||| Sbjct 1845 CAACGTTTAATCTTTGCTGGCAAGCAGCTGGAGGACGGACGTACTCTAGCCGACTATAAC 1786 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | ||||| || || || Sbjct 1785 ATACAGAAGGAATCGACACTCCATTTGGT 1757 Score = 102 bits (112), Expect = 3e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||||| ||||| || || | || || || ||| | Sbjct 2193 ATGCAAATCTTCGTGAAGACTTTGACTGGCAAAACCATCACCTTGGAAGTCGAGCCATGT 2134 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | || ||||| |||||||| ||||| ||||| || |||||| Sbjct 2133 GACACTATCGAGAACGTAAAGGCTAAAATCCAAGATAAAGAAGGCATTCCCCCAGATCAA 2074 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||||||||||||| | || || ||| | |||||||| | | ||| | || || || Sbjct 2073 CAACGTTTAATTTTCGCTGGCAAGCAATTGGAAGATGGCCGTGCCTTGTCCGACTACAAC 2014 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || |||||||| || Sbjct 2013 ATCCAAAAGGAGTCTACCCTTCACTTGGT 1985 >seq25963 Length=3484 Score = 111 bits (122), Expect = 6e-19 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 |||||||| |||||||| ||| ||| | | | || |||| |||| || || || Sbjct 2682 AAAATGAAGGAAACAGCCGAAGCTTATCTGAATACGCCCGTTAAAAATGCTGTTATCACC 2623 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || || ||||||||||| ||||||| || || || |||||||| || || |||||| Sbjct 2622 GTGCCTGCCTATTTCAATGACTCACAACGTCAGGCTACAAAAGATGCTGGCCAAATTGCT 2563 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449 || | ||||| | || | || |||||||||||||| ||||| |||| || || Sbjct 2562 GGACTGAATGTGTTGCGTGTGATCAATGAACCTACAGCCGCTGCATTAGCTTACGG 2507 Score = 84.2 bits (92), Expect = 9e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 451490 GTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTA 451549 |||| |||||| ||||| || ||| ||||| ||| | || |||| || | || || Sbjct 2416 GTATATGATTTGGGTGGTGGTACTTTTGATATTTCAATTCTGGAAATTCAAAAGGGTGTT 2357 Query 451550 TTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || ||||| ||| | || ||||||||||||| || || ||||||||| ||||||| Sbjct 2356 TTCGAAGTTAAGTCCACAAATGGTGATACTCTACTTGGTGGTGAAGATTTTGATAA 2301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974023584302816