Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_014661.1 Length=164093 Score E Sequences producing significant alignments: (Bits) Value seq66944 201 1e-46 >seq66944 Length=5658 Score = 201 bits (222), Expect = 1e-46 Identities = 313/442 (71%), Gaps = 14/442 (3%) Strand=Plus/Plus Query 141455 ATTGATTTGAAGGCCATAATCCATGTGACGAATACGGTTTTCTTCAACACCTTTGTTGTT 141514 ||| | ||||| ||||| ||||||||||||| |||||| ||||| || || ||| || Sbjct 1520 ATTCAATTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCCACGGTTATT 1579 Query 141515 CTTCAACACAATCAAGTTTTCCACTTCAAGGTGCCACATAGGGAAGAACATTGTTGCCGA 141574 |||||| || | || |||||||||| | |||||| || || |||| | |||||| | Sbjct 1580 CTTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAGTGTTGCAGC 1639 Query 141575 ACCTTTACGAATACCACCTTGAGAACAGCAATGAACCGCTGAGTTAAAGTGCTTCCAGAA 141634 ||| || | ||||||||||||||| | | ||| || | | |||||| || | || Sbjct 1640 ACCACCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTGTTTATAAAA 1699 Query 141635 AGGTACTAC-GCCAGTGTGTTTGACTTCGCCTGGGCCAATTTTCGAACCTTC---AGCTC 141690 || | ||| || || || ||||||| | || | |||||| | | || | Sbjct 1700 TGGGA-TACAACCCGTATGAAAAGCTTCGCC---GTCACGTATCGAACTTCCCAAGGCAC 1755 Query 141691 GAATCATGCCTGCGTTAATCCCGATACCTGCTCGCTTAGAAACATACTTAACAATAGCA- 141749 |||| || || ||||| || ||||| || || | |||||||| || ||||| ||| Sbjct 1756 GAATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCACAATTGCAC 1815 Query 141750 --GAGTTTGCATCATTGATTGAGTCAAGGCTGTCACCAGATTCAATAACTACACATGAAC 141807 || ||| |||| || || || ||||| ||||| || ||||| | ||| || |||| Sbjct 1816 TTGAAGTTG---CATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTACGCAGGAAC 1872 Query 141808 TGAATTGACGAGTTGGGGTACGAACACCAGCCATAATTGGAGTAGGCAACGAGATTTTAC 141867 |||| || ||| | || || || ||||| | ||| ||||| || ||||| || |||||| Sbjct 1873 TGAACTGGCGAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGAAATTTTAA 1932 Query 141868 GAGTTGAAACAGCTTCATAAAA 141889 |||||||| ||| || || || Sbjct 1933 AAGTTGAAATAGCATCGTAGAA 1954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524530252941760