Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq14245 262 5e-65 seq66578 172 7e-38 seq25963 116 5e-21 seq66676 104 3e-17 seq65063 96.9 4e-15 seq39072 93.3 5e-14 >seq14245 Length=1352 Score = 262 bits (290), Expect = 5e-65 Identities = 383/534 (72%), Gaps = 12/534 (2%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGA---T 7512 ||||||||||||||||||||| |||||||| || || || | |||||||||||| | Sbjct 1257 ATCGAAATCTTCACCACCCAAATGTGTATCACCGGCAGTTGATTTGACTTCAAAAAGTGA 1198 Query 7513 ACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAG 7572 |||| | |||||| || | || |||||||| || |||||||||| || || || | Sbjct 1197 ACCTTCATCAATGGACAATATGGACACATCAAAAGTTCCACCACCCAAATCGAAGATTAA 1138 Query 7573 TACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 || ||| | ||| | | || ||||| || || || || | ||| || || || || Sbjct 1137 CACATTCTTTTCGCCTTTCAAATTTTTATCCAGCCCATAGGCCAAAGCAGCAGCTGTGGG 1078 Query 7633 TTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 |||||| |||||||| || ||| || ||||| ||||| | | |||||||| ||||||| Sbjct 1077 TTCATTGATAATACGTAGCACA-TTGAGGCCCGCAATTGAACCAGCATCTTTGGTCGCTT 1019 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 | ||||| ||||| |||||||| || || |||| ||| || || | ||||| || Sbjct 1018 GACGTTGGCTGTCGTTGAAGTAGGCTGGCACTGTTATGACGGCATCGGACACTTTACCAC 959 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 | | ||| ||| ||||| || ||| || || || ||||| || |||||||| | Sbjct 958 CCAAATAAACTTCAGCGATTTCGCGCATCTTTGTCAGCACCATTGAACTGATCTCTTCGG 899 Query 7812 CCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCAC 7871 || || |||| ||||||| || || |||||||| || ||||||| || || | Sbjct 898 GTGCGAAACGTTTATTTTCACCTTTGAACTCAACTTCGATTTTGGGTTT-GCCACA--AT 842 Query 7872 CGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGG--TCCGAAAA 7929 || ||| ||||| | | ||||| |||||| || || || | | |||| || || Sbjct 841 CGTTGATCACCTTGAATGGCCAATGTTTCATGTCTTCCTGTA--TTTTGGCATCATCGAA 784 Query 7930 CTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGC 7983 || ||||| || ||||| ||||| || ||||||||||||| ||||||||| Sbjct 783 GCGTCGACCGATCAGTCGCTTGGCATCGAATACTGTGTTTTTGGCGTTCATGGC 730 >seq66578 Length=1850 Score = 172 bits (190), Expect = 7e-38 Identities = 489/745 (66%), Gaps = 10/745 (1%) Strand=Plus/Plus Query 6572 TCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAAT 6631 || ||||| | ||||||| ||||| | | ||| ||||| |||||| | ||| Sbjct 1030 TCCTCATCAGCAAACTTTTCGGCATCACGAATCATACGATCAATATCTTCTGGAGTTAAC 1089 Query 6632 CTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCA 6691 | || |||||| ||||| ||||||||| || |||| |||| ||||||||| Sbjct 1090 CGATTCTGATCATTTGTAATAACAATCTTTTCCTTGTTGCCCGTTCCCTTGTCTTCAGCA 1149 Query 6692 CTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCC 6751 || || | | ||||||||| || || | || || || | ||||||||| |||| Sbjct 1150 CTCACTTGAAGAATACCATTAGCGTCGATTTCAAAGGACACTTCAATTTGTGGCATACCA 1209 Query 6752 CTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCC 6811 | || || | ||||||||| || ||||| ||| | ||||| ||| |||||| | | | Sbjct 1210 CGAGGCGCTGGTGGAATACCAGTCAAATCGAATTTGCCAAGCAAATGGTTATCTTTGGTC 1269 Query 6812 TTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTT 6871 | |||||||||||||| |||| ||| || |||| | || || || || || Sbjct 1270 ATTGGGCGTTCACCTTCATAAACTTGAATGGTTACCGTGTGCTGGTTGTCGGAAGCAGTA 1329 Query 6872 GAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATA 6931 ||||||||||| |||||| | ||| || || || | ||||| | ||||| Sbjct 1330 GAGAAGATTTGCGATTTCTTCGTTGGGATAACGGTGTTACGTGGAATCAATTTTGTCATC 1389 Query 6932 ATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCT 6991 | |||||||| |||||| | || | || || || | || | |||| |||| | Sbjct 1390 ACACCACCCACAGTTTCAATGCCCATAGTCAATGGATTGACAT-CAAGTAAAACA---AT 1445 Query 6992 TG-AACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGC 7050 | | | | || | |||||| | | | ||||||| || | || || ||||| Sbjct 1446 AGCATCTGTATCTT---GTTCACCAGAAAGTACACCGGCTTGTACAGCAGCACCATATGC 1502 Query 7051 GACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAA 7110 ||| || |||||||||||||| | |||||||| ||||| | || | Sbjct 1503 GACAGCTTCATCGGGGTTAATGCCACGAGATGGTTCTTTATTATTAAAGAAGTCTTTGAC 1562 Query 7111 CATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTT 7170 | |||||| | ||| || || ||||| ||||||||||| || || ||||||| || | Sbjct 1563 AAGTTGTTGTACTTTGGGAATACGTGTTGATCCACCGACTAACACAATTTCATGTACATC 1622 Query 7171 CGATTTATCGATCTTTGAGTC-TCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGA 7229 ||| | || | | || || || || | || || | || | | ||||| Sbjct 1623 TTTTTTGTTCATATCGGCATCTTCTAAAACCTTAGT-AACTGGCTTCAAAGTTGAACGGA 1681 Query 7230 ACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGC 7289 | ||||||||| || ||| ||||| ||||| || | | | ||||||| | | Sbjct 1682 ATAAGTCCATATTCAATTCTTCAAATTTGGCACGTGTTAGTGTTTCGGAGAAATCTTCAC 1741 Query 7290 CGTCGTATAACGAATCAATTTCAAT 7314 |||| | ||||| ||||||||||| Sbjct 1742 CGTCAAAGAACGATTCAATTTCAAT 1766 >seq25963 Length=3484 Score = 116 bits (128), Expect = 5e-21 Identities = 211/309 (68%), Gaps = 0/309 (0%) Strand=Plus/Plus Query 6667 TTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAA 6726 ||| |||| |||| || | ||| |||| | ||||||||| ||||||| |||||| Sbjct 1392 TTTGCCCGTACCCTTGTCCTTGGCAGACACATGTACAATACCATTAGCATCAATATCGAA 1451 Query 6727 CCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGT 6786 || | ||||| || ||| | ||||| | |||||| ||| ||| || | Sbjct 1452 TACAACTTCGATTTGAGGAACACCACGTGGTGCAGGTGGAATGCCCACCAAAGTGAACGA 1511 Query 6787 ACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCAC 6846 |||||| | ||||||| | |||| | | ||||||||||| || ||||||||| || Sbjct 1512 ACCAAGCATCTTGTTATCAGCCGCCATTTCACGTTCACCTTGATGCACTTTAATTTCAAC 1571 Query 6847 CGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGT 6906 | ||| ||| |||||| ||||| | |||| ||||||| ||||| || || Sbjct 1572 TTGTGTTTGGCCATCAGCTGCCGTCGAGAATACTTGTGACTTCTTAGTGGGAATAGTGGT 1631 Query 6907 ATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGG 6966 ||| | | ||||| | || | | ||||||| |||||||| || | ||||| ||| Sbjct 1632 ATTACGTGAAATAAGACGCGTAAACACTCCACCCAAAGTTTCGATACCCAAAGACAAAGG 1691 Query 6967 TGTCACGTC 6975 ||| || || Sbjct 1692 TGTAACATC 1700 >seq66676 Length=2089 Score = 104 bits (114), Expect = 3e-17 Identities = 286/431 (66%), Gaps = 18/431 (4%) Strand=Plus/Plus Query 11221 TGTACTTTGAGTATTTCTTCACGTCCGTGAACATCAGGTAAAGAAACTTGTATTTTACGA 11280 |||||||| || || | |||||| || ||||||| || | || | || ||| Sbjct 1337 TGTACTTTCAGGATCTGTTCACGACCACGAACATCTGGCAGGCCTACAACGACTTGGCGA 1396 Query 11281 TCAAATCTACCGGGGCGTAATAACGCATCGTCGAGTATATCGATACGGTTTGTTGCACCT 11340 || || | ||| || || |||| ||| ||| || | ||| ||||| || || | Sbjct 1397 TCGAAGCGACCAGGACGCAATAGCGCGGGGTCAAGAACATCAGGGCGGTTAGTCGCTGCG 1456 Query 11341 ATAACAACAATTTCAGTTTCATT---CTCGAAACCATCCATTTCTGTTAATAATTGGTTA 11397 ||||||| || | |||||| ||||||||| ||||| || || | ||||| Sbjct 1457 ATAACAATGATACC---TTCATTACCCTCGAAACCGTCCATATCAACTAGCATCTGGTTC 1513 Query 11398 ATTGTTTGTTCACGCTCATCGTTTGC--CGC--AAACCCATTCATACTTCTTTTCTTACC 11453 | ||| || ||||| ||||| | | ||| ||||| | || | | | ||| Sbjct 1514 AATGTCTGCTCACGTTCATCATGACCACCGCCTAAACC--TGCA--CCGCGCTGACGACC 1569 Query 11454 AATCGCATCAATTTCATCTATAAAGATAATACACGGT--TGATTTTCACGTGCCAATTCA 11511 | ||||| |||||||| ||||| ||||| || || || |||| |||| |||| Sbjct 1570 TACGGCATCTATTTCATCAATAAAAATAATGCATGGAGCTGCTTTTTT--TGCCTGTTCA 1627 Query 11512 AATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGACCCC 11571 || |||||||| || | ||| ||||| || || ||||||||||| || || || Sbjct 1628 AACATATCACGTACGCGAGATGCACCTACACCAACGAACATTTCAACAAAATCAGAACCG 1687 Query 11572 GAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGTGTTTTA 11631 ||| || |||||| || || |||||| || || || ||||| | ||||||| Sbjct 1688 GAAATAGTAAAAAAAGGCACTTTAGCTTCACCGGCAATTGCTTTTGCTAGTAATGTTTTA 1747 Query 11632 CCTGTACCTGG 11642 |||||||| || Sbjct 1748 CCTGTACCCGG 1758 >seq65063 Length=1025 Score = 96.9 bits (106), Expect = 4e-15 Identities = 211/313 (67%), Gaps = 10/313 (3%) Strand=Plus/Minus Query 183161 CCGGTACCAATACCTTCAGTTCCATTTACCAAAACGGTCGGTAATATAGGAACATAATAG 183220 || || |||||||| |||| ||||| || || || |||||| || || ||||| | Sbjct 751 CCTGTGCCAATACCATCAGCACCATTCACTAATACCATCGGTATAATTGGCACATACCAT 692 Query 183221 TCAGGTTCGATTTGTTTACCGTCGTCGTCGAGATAGTTTAATACTGGATCATCTTTGGGA 183280 | ||||| || | || ||| || || | || | |||| ||||||||| ||| Sbjct 691 TGTGGTTCAATCTTTTGACCATCATCAACTTCGTACGTCAATAATGGATCATCAGATGGA 632 Query 183281 TCAAAAAGTATTCTCGCGTTTTTAGTCAATTT--TGTAAATATATACCTGGTTTGACTCG 183338 | || | | | ||||| | || | | ||| || ||||| | | ||| | Sbjct 631 TGGAATATGAGCC--GCGTTAATGGTGACATCAATGTGAAAATATAACGAGC---ACTAG 577 Query 183339 CG---TCTTTACCACCCATGAGACGTGTACCAAATTGACCACATGGTTCGAGTAAATTAA 183395 | ||||| ||||| ||||| ||||| |||||||| | |||||| |||||||||| Sbjct 576 CACAATCTTTGCCACCTTGTAGACGCGTACCGAATTGACCGCGTGGTTCTAGTAAATTAA 517 Query 183396 TATTATTCGACCCCGTAAAATTATGTGCTAATTTTACAATTGTATCTGCCAAAGAGACTT 183455 | || || || || | |||| || ||||| || ||||||||| | || || | || Sbjct 516 TGTTGTTTGAACCAACATAATTTTGCGCTAAATTAACAATTGTAGATTGTAATGACATTT 457 Query 183456 CACCGTGGTGATA 183468 ||||||| ||||| Sbjct 456 CACCGTGATGATA 444 >seq39072 Length=1651 Score = 93.3 bits (102), Expect = 5e-14 Identities = 118/162 (73%), Gaps = 3/162 (2%) Strand=Plus/Plus Query 7988 TGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGAT 8047 || || || ||||| || ||||| | |||||| ||| | |||| || || || Sbjct 702 TGATTTTTGGCCGCATCGCCGATTAAACGTTCGGTATCGT---TAAATGCAACATAACTG 758 Query 8048 GGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACG 8107 || || || ||||| ||||| ||||| ||||| || || || || ||| ||||| ||| Sbjct 759 GGCGTGGTGCGATTGCCTTGATCGTTGGCAATGATCTCGACTTTGTTGTTCTGCCAAACG 818 Query 8108 CCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCT 8149 || ||||| || || || || || ||||||||||| |||||| Sbjct 819 CCAACGCAGGAGTAGGTGGTGCCCAAATCAATACCAATTGCT 860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634601257359680