Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq25273 138 3e-27 seq44371 123 6e-23 >seq25273 Length=2210 Score = 138 bits (152), Expect = 3e-27 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCT 194995 |||||| || ||||| ||||| || ||||| |||| |||| | | |||||||| | | Sbjct 1990 GTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGGACAAG-GCACGGCCATCTTCCAATT 2048 Query 194996 GCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTT 195055 |||| || ||||| || | |||||||| ||||| |||||||||||||| ||||| |||| Sbjct 2049 GCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGGGGAATGCCTTCTTTATCTTGGATTT 2108 Query 195056 TTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTG 195115 | ||| |||||||| || ||||| | || ||||| | ||| | || || || | Sbjct 2109 TAGCCTTTACGTTCTCGATAGTGTCACATGGCTCGACTTCCAAGGTGATGGTTTTGCCAG 2168 Query 195116 TCAAAGTTTTTACGAACACTTGCAT 195140 ||||||| || ||||| | |||||| Sbjct 2169 TCAAAGTCTTCACGAAGATTTGCAT 2193 Score = 105 bits (116), Expect = 1e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || || || || || || || || || ||||| ||||| | || || || |||||| Sbjct 1763 TGGAGTGTCGATTCCTTCTGTATGTTATAGTCGGCTAGAGTACGTCCGTCCTCCAGCTGC 1822 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || ||||| | ||||| || ||||||||||| || || || ||||| || || Sbjct 1823 TTGCCAGCAAAGATTAAACGTTGCTGATCTGGAGGAATACCCTCCTTATCTTGGATCTTG 1882 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| || || ||||| || || || || ||||| | || | ||||| |||||| Sbjct 1883 GCCTTTACATTTTCAATAGTATCGGATGGCTCAACTTCTAAAGTGATAGTCTTGCCTGTC 1942 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 || || || || || | |||||| Sbjct 1943 AATGTCTTGACAAAAATTTGCAT 1965 >seq44371 Length=3624 Score = 123 bits (136), Expect = 6e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | ||| || || || | || || || |||||||| || ||||| || | || Sbjct 1100 TCTGAGACGCAATACTAGATGCAACGTAGATTCCTTTTGAATGTTATAATCAGCCAAGGT 1159 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || || ||||| | || || || ||||| || | ||||| ||||| || ||||| || Sbjct 1160 TCGTCCGTCTTCCAATTGTTTGCCAGCGAAAATTAAGCGTTGCTGGTCAGGTGGAATTCC 1219 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||||||||| || || || | ||||| || |||||| ||| || ||||| Sbjct 1220 TTCCTTGTCTTGAATCTTAGCTTTAACATGTTCAATAGTATCCGAAGGTTCAACCTCAAG 1279 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATGG 195146 || | || || || || | |||||| || || | |||||||| ||| Sbjct 1280 TGTGATGGTTTTACCCGTAAGAGTTTTAACAAAAATTTGCATTTCTGG 1327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108529861720184