Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq66944 104 3e-17 >seq66944 Length=5658 Score = 104 bits (114), Expect = 3e-17 Identities = 215/315 (68%), Gaps = 4/315 (1%) Strand=Plus/Plus Query 93944 TTGGATTATATGACGTATTGGCTGAGATGGATTGATCCATAAACTTTTGCATAACAGCAA 94003 |||||| ||| ||||| | ||| || | |||||| |||||||| ||||| | | ||| Sbjct 436 TTGGATCATAGTTAGTATTAGATGAAATTGCTTGATCGATAAACTTCTGCATCAGACCAA 495 Query 94004 CAATGTTTAGATATCCTTCCATACTTTCCATATCCCATAGAAGGGTATAGTCATTTTTCA 94063 | | | || ||| || || || || ||||||||| || | ||| || ||| | Sbjct 496 CCAGCTGTAAATAACCATCATTATTTGGCATATCCCACAGCATTTCATAACTATCTTTTA 555 Query 94064 -AGGTTCCATAACTAGGAACGATCTGTTTCAGTGTTCCTTTCTTAGACTTCTTCACAGAA 94122 | | || ||| || |||| || || | || | || || | ||| | | Sbjct 556 GACGCTC-ATATTCCGGTACGACTTGGCGAAGAATGCCATCTTTTGA-TGCTTTAATGCT 613 Query 94123 -AGATAATCTCTAGGTGGCTCAATACCATTGGTGGTATTACACACGACCGAAGATGATTC 94181 | || | | | |||||| |||||||||||||| | ||| | | ||| |||| ||| Sbjct 614 GATATGACCACGAGGTGGTTCAATACCATTGGTCGCGTTAGATATCTGCGATGATGTTTC 673 Query 94182 AGATGGCATCTGTGCAGACAGAGTAGAATTTCGTAGACCGAATACCTTAATCTTCTCACG 94241 ||| |||||| ||||||| |||||||| || ||||||||| | || ||||| || || Sbjct 674 AGAAGGCATCAGTGCAGATAGAGTAGAGTTACGTAGACCGTAGACTTTAATTGATTCGCG 733 Query 94242 TAGAACTTCCCAGTC 94256 ||| |||||||||| Sbjct 734 TAGTTCTTCCCAGTC 748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570795501124160