Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq44017 132 5e-26 seq25972 86.0 7e-12 >seq44017 Length=1387 Score = 132 bits (146), Expect = 5e-26 Identities = 300/445 (67%), Gaps = 11/445 (2%) Strand=Plus/Minus Query 46973 tttttCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACC 47032 ||| || || ||||| | || | ||| || | ||| || |||||||||||||| || Sbjct 441 TTTATCAACTGTAAATTGTATAGCATTTGCAGCCGGTTTGGTACGTAAATAATACATGCC 382 Query 47033 AGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGG 47092 ||| || | ||| |||| ||||| ||||| ||| |||| || ||| | || Sbjct 381 AGTTTTGAGACCCGCCTTCCAACCATAAAAATGTATAGATGTTAGCTTGCCATAGTTTGG 322 Query 47093 TTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGC 47152 ||| | | ||| ||||||| |||||||| ||||||||||| || || | |||||| || Sbjct 321 TTCAGCTACATGTATATTAAACGATTGACTTTGATCAATAAACGCGCCACGATCAGCGGC 262 Query 47153 CATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTC 47212 ||| | | || | | | ||| ||||| || || || |||| || || | Sbjct 261 CATCTTCATTGTAGTCTTCACCGATATTTCCCACACAGTCTTGTAAAGTTCACGTATTTT 202 Query 47213 TTCTGG--GAGATT-AGTATTTTGAATAGATCCTCCgttttctataatttt-gtttt--t 47266 || ||| ||||| | || ||| || || || | | ||||||||| ||||| | Sbjct 201 TTGTGGTATAGATTCAATACCTTGTATTGAACCACGACTGGTTATAATTTTAGTTTTCAT 142 Query 47267 taattcatttgaccaa-agttttcgttcagttaatgtttttaaAAGATGAGGATTAACAA 47325 | ||||| || || |||| | || | | || | |||| ||||||||| Sbjct 141 TTCTTCATCCCACAAACCCAATTCGGTAAGATCGCG----CAACAAATGATGATTAACAA 86 Query 47326 TTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAG 47385 ||||||||| || || ||||| | ||| |||| || ||| ||||| ||||| | || Sbjct 85 CTTGAAATTCGCCCGAAAGTACGCGACGATTATAAATGTTAGAAGTATAAGGTTCAAAAG 26 Query 47386 ATTCATTATTTCCAAAAATTTGAGC 47410 |||||||||| || | |||||| || Sbjct 25 ATTCATTATTGCCCATAATTTGTGC 1 >seq25972 Length=1146 Score = 86.0 bits (94), Expect = 7e-12 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 136631 GTAATGACTCCTATTAACCCAATGTTGGCAGAATCATGTGAATCTGTAGATAAAGCATTT 136690 || ||||||||||| |||||||||||| | | || |||| ||||| | ||||| Sbjct 275 GTGATGACTCCTATATCACCAATGTTGGCAAATGCTTGCAAATCAGTAGACCAGGCATTC 216 Query 136691 AAAAAGTTTCCAAATGGAATATTTGCAGAAATAAAATATGACGGAGAACGTGTACAGGTT 136750 ||||||| |||||||| | | | |||||||| ||||| || || || || || | Sbjct 215 AAAAAGTGCCCAAATGGTTTGTACACCGAAATAAAGTATGATGGTGAGCGCGTGCAAATA 156 Query 136751 CACAAGAATGGAAACCACTTTGCATTTTTTAGTAGAAACATGAAACCCGT 136800 || ||| | || || | || |||||||||| |||| | ||||| || Sbjct 155 CATAAGCAGGGTAATGAATTCAAATTTTTTAGTCGAAATTTAAAACCGGT 106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561638371145280