Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq64152 178 1e-38 seq25963 140 3e-27 seq61428 123 2e-22 seq44371 123 2e-22 seq14245 122 7e-22 seq54016 89.7 4e-12 >seq64152 Length=1479 Score = 178 bits (196), Expect = 1e-38 Identities = 222/303 (73%), Gaps = 6/303 (2%) Strand=Plus/Plus Query 368794 GTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTATCCATTT 368853 ||||| ||||| ||||||||||| ||||||||||| | || ||| ||||| ||||||| Sbjct 79 GTTTTTGATTGTTGGTTTGAATCGGGTTCTATGCCATTTGCACAACAACATTTTCCATTT 138 Query 368854 GATAACGCAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTTGTAACAGAATCA 368913 || || | |||| | ||| |||| || || | || |||||| | | || Sbjct 139 GAAAATGAAAAAGATTTT----ATGAATAA--TTTTCCTGCGGATTTTATTGCTGAGGGC 192 Query 368914 ATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACAGCTATTTTCGAT 368973 |||||||| |||||||||||||||||||| || |||||| | || || ||| | ||| || Sbjct 193 ATTGATCAGACACGTGGTTGGTTTTATACGCTCTTAGTAATTTCAACGGCTTTATTCAAT 252 Query 368974 AAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTTAATGCATCTGATGGTCAAAAG 369033 || || ||||||||||| |||| | | |||| | ||| ||| ||||||| || || Sbjct 253 AAGGCGCCTTTTAAAAATTTAATTGCCAATGGTCTGGTTTTAGCAGCTGATGGACAGAAA 312 Query 369034 ATGTCAAAAAGTAAGGGTAATTATTCCGATCCTAATATTTTAATTGATAAATTTGGTGCT 369093 ||||||||| ||||| |||||| | ||||| | || || ||||| |||||| Sbjct 313 ATGTCAAAACGTAAGAAAAATTATCCAGATCCCATGGAGGTAGTTTGTAAATATGGTGCC 372 Query 369094 GAT 369096 ||| Sbjct 373 GAT 375 >seq25963 Length=3484 Score = 140 bits (154), Expect = 3e-27 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 550315 ATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGC 550374 || ||||||| ||||||| | | |||||||||||||||| |||||||| || Sbjct 2719 ATATTCACCATCACAAATTGGTGCGTTCATTTTAATGAAAATGAAGGAAACAGCCGAAGC 2660 Query 550375 TTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTC 550434 || | | | |||| |||| || || || || || || ||||| |||||||| Sbjct 2659 TTATCTGAATACGCCCGTTAAAAATGCTGTTATCACCGTGCCTGCCTATTTCAATGACTC 2600 Query 550435 ACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTAT 550494 ||||||||| ||||| ||||||||||| | ||||||||||| ||||| | ||| | || Sbjct 2599 ACAACGTCAGGCTACAAAAGATGCTGGCCAAATTGCTGGACTGAATGTGTTGCGTGTGAT 2540 Query 550495 CAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 |||||||||||| || |||||| | || || || | ||||| Sbjct 2539 CAATGAACCTACAGCCGCTGCATTAGCTTACGGCATGGATAA 2498 >seq61428 Length=1331 Score = 123 bits (136), Expect = 2e-22 Identities = 143/190 (75%), Gaps = 6/190 (3%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || || |||||| ||||||||||||| ||| |||| ||||| || Sbjct 631 GGCATTGATCTTGGCACAACATATTCATGTGTTGGTGTTTTTCAACATGGCAAAGTCGAT 690 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || || ||||||||||| || || | ||||||||| ||||| | ||||| || || Sbjct 691 ATCATAGCCAATGATCAGGGCAATCGTGTTACTCCATCATATGTGGCCTTCACCGATACG 750 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTACCAATACT 550174 || | ||| ||||||||||||| ||| |||| ||||| || ||||| | |||||| Sbjct 751 GAGCGTTTGATTGGTGATGCAGCCAAAAATCAAGTAGCCA-TG--AATCCGAATAATACT 807 Query 550175 ATTTTTGATG 550184 ||||||| || Sbjct 808 ATTTTTGGTG 817 >seq44371 Length=3624 Score = 123 bits (136), Expect = 2e-22 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||||| | ||| ||||| | ||| ||| || ||| || |||||||| | ||| Sbjct 1101 CTGAGACGCAATACTAGATGCAACGTAGATTCCTTTTGAATGTTATAATCAGCCAAGGTT 1160 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | ||||| | |||||| || || ||||| | | |||||| ||||| ||||||||| Sbjct 1161 CGTCCGTCTTCCAATTGTTTGCCAGCGAAAATTAAGCGTTGCTGGTCAGGTGGAATTCCT 1220 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGA 563433 || || |||||||| || ||| || ||||| ||||| | | | || || Sbjct 1221 TCCTTGTCTTGAATCTTAGCTTTAACATGTTCAATAGTATCCGAAGGTTCAACCTCAAGT 1280 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | |||||||| |||||||||||||| ||||||||||| Sbjct 1281 GTGATGGTTTTACCCGTAAGAGTTTTAACAAAAATTTGCAT 1321 >seq14245 Length=1352 Score = 122 bits (134), Expect = 7e-22 Identities = 118/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 550389 AAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTA 550448 |||| | ||||| || ||||| || ||||| || || || ||| ||||||||||| | Sbjct 965 AAGTGTCCGATGCCGTCATAACAGTGCCAGCCTACTTCAACGACAGCCAACGTCAAGCGA 1024 Query 550449 CTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTG 550508 | ||||||||||| ||||| || || ||||| || ||||||||||||||||| || | Sbjct 1025 CCAAAGATGCTGGTTCAATTGCGGGCCTCAATGTGCTACGTATTATCAATGAACCCACAG 1084 Query 550509 CTGCTGCACTTGCATATGGACTTGATAAACAT 550540 ||||||| | || ||||| || |||||| || Sbjct 1085 CTGCTGCTTTGGCCTATGGGCTGGATAAAAAT 1116 >seq54016 Length=2141 Score = 89.7 bits (98), Expect = 4e-12 Identities = 149/214 (70%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 367535 ATTTTGA-ACGTATTGGAAGATGGATTGACGTAAAAAATGAATATAAAACAATGGATACT 367593 ||| ||| |||||| ||| | |||||||| | |||||| ||||||||| || || | Sbjct 527 ATTGTGACACGTATGGGACGTTGGATTGATTTTCGAAATGATTATAAAACACTGTATCCA 586 Query 367594 AATTTCATGGAATCTGTTATTTGGGCATTTAAACAATTATACGAACGCGGTATGATTTTT 367653 | |||||| || || |||| || |||||| | || || || | ||| | Sbjct 587 TGGTATATGGAAACTATTTGGTGGGTTTTCAAACAACTCTATGATAAAGGATTAGTTTAT 646 Query 367654 GAAGGTTATAAAGTAATGCCATATTCAACTGGTTGTAATACTGCTTTGTCACATTTTGAA 367713 |||| ||| ||||||||||||||||| | ||| | || || | || |||| ||| Sbjct 647 CAAGGCGTTAAGGTAATGCCATATTCAACGGCTTGCACGACAGCACTCTCTAATTTCGAA 706 Query 367714 GCCAAACAAAATTATCGAGAAGTAGTTGATCCAT 367747 | |||||||||| |||||| || ||||||| Sbjct 707 TCTGGACAAAATTATAAAGAAGTTGTGGATCCAT 740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4025755276286480