Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_017985.1 Length=40128 Score E Sequences producing significant alignments: (Bits) Value seq3939 354 2e-93 >seq3939 Length=2233 Score = 354 bits (392), Expect = 2e-93 Identities = 325/412 (79%), Gaps = 8/412 (2%) Strand=Plus/Plus Query 22148 AACGAACAGCAAACCACGCTGTTGATCACATACATGCGAAACAATGAAGTTGTGCGTGAA 22207 ||||| ||||||||||||||| ||||||| |||||||| ||||| || |||| || | Sbjct 1016 AACGAGCAGCAAACCACGCTGCTGATCACTTACATGCGGAACAACGACATTGTTCGGGCG 1075 Query 22208 TTCAAAAAGCGCCTGGTAGCTGAATTCTTCACTATGCGTAGCGCGCTGGCGAAAAAGAAA 22267 || |||||||| |||| || ||||| ||| |||||| | ||||| ||| ||||| Sbjct 1076 TTTAAAAAGCGGTTGGTTGCGGAATTTTTCCGTATGCGCAAGGCGCTAGCGGGCAAGAAG 1135 Query 22268 ATGGATCGCAACTCTGCACGCCTGGAGTACAAACCCATGACCGACGCCATCAAACATGAG 22327 ||||| |||||| |||| || || |||||| || ||||| ||||||||||| |||||| Sbjct 1136 ATGGACCGCAACACTGCCCGTCTTGAGTACCGCCCAATGACAGACGCCATCAAGCATGAG 1195 Query 22328 CGAGAGGCTCAGGGTAAGCAGATCGCCCCGCATCACTTCAGCAACGAAGCTGACCTGATT 22387 ||||| || ||||| ||| || || |||||||||||||||||||| || ||||||||| Sbjct 1196 CGAGAAGCGCAGGGCAAGGCCATTGCTCCGCATCACTTCAGCAACGAGGCCGACCTGATT 1255 Query 22388 AACCGACTGGCGCTGGGAATGACGGCGGCCAAGTTCCGCGTGCATCACGAAATCGGGAAG 22447 ||| | | || || || | || |||||||| | |||||||||| |||| Sbjct 1256 AACTGTATCGCACT--------TGGTNGAAAAATTCCGCGTTTACCACGAAATCGAGAAG 1307 Query 22448 AAAGAGCCGATCCGCGATTACCTGACGCCGGAACAAATTCACTGCATCACCGAGCTACAG 22507 |||||| | |||||||| || ||||| ||||| ||||| | |||||||| ||||| || Sbjct 1308 AAAGAGTCAATCCGCGACTATCTGACACCGGAGCAAATCCGTTGCATCACGGAGCTTCAA 1367 Query 22508 CGCGCCAACACGGTATTCATCAGCATGGGGTGGGACTTCGAACAACGCAAAG 22559 || |||||||||||||||||| ||||||| |||||||| ||||||||||||| Sbjct 1368 CGTGCCAACACGGTATTCATCGGCATGGGCTGGGACTTTGAACAACGCAAAG 1419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128186003984160