Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_018087.3 Length=166687 Score E Sequences producing significant alignments: (Bits) Value seq66944 149 7e-31 >seq66944 Length=5658 Score = 149 bits (164), Expect = 7e-31 Identities = 328/480 (68%), Gaps = 19/480 (4%) Strand=Plus/Plus Query 141721 AAGAATGCATCATAAAGTTTACCCTCTAGTACATC---CGGGCTAAACAATGTAACATAA 141777 ||||||||||| || || ||| | | ||||| ||| ||||| | |||| || Sbjct 1434 AAGAATGCATCGTATAG---ACC---TGGCACATCTGACGGACTAAATAGAGTAATATC- 1486 Query 141778 TCATCCATTAAATAG-CGTTCAATCATTAAATTGTTTAATTGAATACCATAATCCATATG 141836 || ||| | | ||| || | | ||| | || || ||||||| |||||| ||||| || Sbjct 1487 TCTTCCCTGGAGTAGGCGCTGATACATCAGTTTATTCAATTGAACACCATAGTCCATGTG 1546 Query 141837 ACGAATACGGTTTTCTTCAATGCCCTTATTGTTCTTAAGAACCA-TAAGGTTTTCACATT 141895 ||||| |||||| ||||| | ||| || ||||| | |||| ||| ||| ||| || Sbjct 1547 ACGAACACGGTTATCTTCTACGCCACGGTTATTCTTCAAGACCAGTAAACTTTCCAC-TT 1605 Query 141896 CTAAATGCCAAATAGGCCAGTACGCAGTAGCAGAACCTTTACGAATACCACCTTGAGAAC 141955 | || ||||| || || || | || |||| ||| || | |||||||||||||| Sbjct 1606 CCAAGTGCCATATTGGATAGAATAGTGTTGCAGCACCACCGCGTACACCACCTTGAGAAC 1665 Query 141956 ATGAATGGACCGCTGCATTTTTAAGT--TTCCAAAATGGTGTTACA-CCAGTGTGTTTAA 142012 | || | || || | | | |||| || ||||||| | |||| || || || | Sbjct 1666 AAGATTTAACTGCGG--TCTGAAAGTGTTTATAAAATGG-GATACAACCCGTATGAAAAG 1722 Query 142013 CTTCACCTGGACCAATTTTAGACCCTTCGGCACGGATTGCACCACCGCCGATACCAATAC 142072 |||| || || || | || |||||| ||| ||| | || ||||||| Sbjct 1723 CTTCGCCGTCACGTATCGAACTTCCCAAGGCACGAATTCGACCGGCATTAATGCCAATAC 1782 Query 142073 CAGCACGTTTAGAAACATATTTTACAATAGCTGATGTACTTTCAGTAATTGAATCTAGGC 142132 |||| |||| ||||||||||| ||||| || || | || || |||| ||||| |||| Sbjct 1783 CAGCCCGTTGGGAAACATATTTCACAATTGCACTTGAAGTTGCATTAATCGAATCGAGGC 1842 Query 142133 TATCGCCGGTTTCAATTAAAACACATGAACTAAATTGACGAGTTGGGGTACGAACACCGG 142192 |||| |||| ||||||| || || ||||| || || ||| | || || || ||||||| Sbjct 1843 TATCACCGGACTCAATTAGTACGCAGGAACTGAACTGGCGAATAGGTGTGCGTACACCGG 1902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532824106002240