Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_018279.1 Length=49116 Score E Sequences producing significant alignments: (Bits) Value seq3939 356 7e-94 >seq3939 Length=2233 Score = 356 bits (394), Expect = 7e-94 Identities = 327/415 (79%), Gaps = 8/415 (2%) Strand=Plus/Plus Query 47632 CTAAACGAACAGCAAACCACGCTGTTGATCACCTACATGCGAAACAATGAAGTTGTGCGT 47691 || ||||| ||||||||||||||| ||||||| |||||||| ||||| || |||| || Sbjct 1013 CTTAACGAGCAGCAAACCACGCTGCTGATCACTTACATGCGGAACAACGACATTGTTCGG 1072 Query 47692 GAATTCAAAAAGCGCTTGGTATATGAATTCTTCACTATGCGCAGCGCGCTGGCGAAGAAG 47751 | || |||||||| ||||| ||||| ||| |||||||| ||||| ||| ||| Sbjct 1073 GCGTTTAAAAAGCGGTTGGTTGCGGAATTTTTCCGTATGCGCAAGGCGCTAGCGGGCAAG 1132 Query 47752 AAGATGGATCGCAACTCGGCGCGTCTGGAGTACAAGCCTATGACCGATGCCATCAAGCAT 47811 |||||||| |||||| | || ||||| |||||| || ||||| || |||||||||||| Sbjct 1133 AAGATGGACCGCAACACTGCCCGTCTTGAGTACCGCCCAATGACAGACGCCATCAAGCAT 1192 Query 47812 GAGCGTGAGGCGCAGGGTAAGCAGATCGCCCCGCATCACTTCAGCAACGAAGCTGACCTG 47871 ||||| || |||||||| ||| || || |||||||||||||||||||| || |||||| Sbjct 1193 GAGCGAGAAGCGCAGGGCAAGGCCATTGCTCCGCATCACTTCAGCAACGAGGCCGACCTG 1252 Query 47872 ATTAATCGACTGGCGCTGGGCATGACGGCGGCCAAGTTCCGCGTGCATCACGAAATCGGG 47931 ||||| | | || || || | || |||||||| | |||||||||| | Sbjct 1253 ATTAACTGTATCGCACT--------TGGTNGAAAAATTCCGCGTTTACCACGAAATCGAG 1304 Query 47932 AAGAAAGAGCCGATCCGCGATTACCTGACGCCGGAACAAATTCACTGCATCACCGAGCTA 47991 ||||||||| | |||||||| || ||||| ||||| ||||| | |||||||| ||||| Sbjct 1305 AAGAAAGAGTCAATCCGCGACTATCTGACACCGGAGCAAATCCGTTGCATCACGGAGCTT 1364 Query 47992 CAGCGCGCCAACACGGTATTCATCAGCATGGGGTGGGACTTCGAACAACGCAAAG 48046 || || |||||||||||||||||| ||||||| |||||||| ||||||||||||| Sbjct 1365 CAACGTGCCAACACGGTATTCATCGGCATGGGCTGGGACTTTGAACAACGCAAAG 1419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156924736930272