Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_018843.1 Length=103299 Score E Sequences producing significant alignments: (Bits) Value seq66944 262 3e-65 >seq66944 Length=5658 Score = 262 bits (290), Expect = 3e-65 Identities = 722/1100 (66%), Gaps = 10/1100 (1%) Strand=Plus/Minus Query 68397 CCGGTAAGACGCGTCTGGAGATGGTTAAGGGCTTCTACGATGTGACCAGTACATTCAAGT 68456 |||| || || || || || || ||| |||||||||||| | || || || Sbjct 1986 CCGGCAAAACTCGCCTCGATTATGTAAAGCGCTTCTACGATGCTATTTCAACTTTTAAAA 1927 Query 68457 TGTCTCTGCCAACGCCAATTATGGCCGGCGTGCGCACCCCTACTCGCCAGTTCTCCAGCT 68516 | ||| |||| || ||||| ||| |||| || ||||| |||| |||||||||| || Sbjct 1926 TTTCTTTGCCCACACCAATCATGTCCGGTGTACGCACACCTATTCGCCAGTTCAGTTCCT 1867 Query 68517 GCGTGCTGATTGAAGCTGCTGATAGTCTGAAAGGGATTAGCGCTGCGTCTTCCGCAATCA 68576 |||| || ||||| | | |||||| || | ||||| || | || ||||| Sbjct 1866 GCGTACTAATTGAGTCCGGTGATAGCCTCGATTCGATTAATGCAACTTCAAGTGCAATTG 1807 Query 68577 TCGACTACGTGTCACGTCGCGCGGGCATTGGTATTGGCTTTGGGCGTCTGCGTGCGCTGG 68636 | | || || || | || || || ||||| ||| || || | ||||| ||| Sbjct 1806 TGAAATATGTTTCCCAACGGGCTGGTATTGGCATTAATGCCGGTCGAATTCGTGCCTTGG 1747 Query 68637 GCAGTGAGATCCGCAATGGCGAGGCCACCCACACTGGCGTTTTTCCATTCCTGAAACACT 68696 | ||| ||| || | ||||| || || || || | | ||||| ||||||| Sbjct 1746 GAAGTTCGATACGTGACGGCGAAGCTTTTCATACGGGTTGTATCCCATTTTATAAACACT 1687 Query 68697 TCCAGACGGCGGTGAAATCCTGCTCTCAGGGCGGTGTTCGCGGCGGCGCTGCTACAGCGT 68756 | ||||| || || ||||| || ||||| || ||||| ||||| || ||||| ||| | Sbjct 1686 TTCAGACCGCAGTTAAATCTTGTTCTCAAGGTGGTGTACGCGGTGGTGCTGCAACACTAT 1627 Query 68757 TCTATCCGATCTGGCACTTGGAAGTTGAAAGTCTGCTGGTGCTGAAAAACAACCGTGGCA 68816 ||||||| || |||||||||||||| |||||| | ||||| |||| || ||||||||| Sbjct 1626 TCTATCCAATATGGCACTTGGAAGTGGAAAGTTTACTGGTCTTGAAGAATAACCGTGGCG 1567 Query 68817 TTGAAGAGAACCGCGTTCGTCATCTCGACTATGGCGTGATGATCAACCGTCTGATGTATC 68876 | ||||| ||||| |||||||| | |||||||| || | || |||||||||| Sbjct 1566 TAGAAGATAACCGTGTTCGTCACATGGACTATGGTGTTCAATTGAATAAACTGATGTATC 1507 Query 68877 GCCGCCTGGTGC-GCAACGAAAACATTACGCTGTTCAGCCCACACGATGTGCCGGGCCTG 68935 ||||| | | | | | | | ||||| || || || || |||||||| || || Sbjct 1506 AGCGCCTACTCCAGGGAAG-AGATATTACTCTATTTAGTCCGTCAGATGTGCCAGGTCTA 1448 Query 68936 TACGACGCGTTCTTTGTTGATCAGGACAAGTTCGAAGAGCTGTACCTGAAGTACGAAGCC 68995 ||||| || ||||||| ||||||||| | || ||| ||||| || || ||| Sbjct 1447 TACGATGCATTCTTTGCTGATCAGGAAGAATTTGAACTCCTGTATACAAAATATGAAAAA 1388 Query 68996 GACGAGAGCATCCGTAAGAAATCTATCCCGGCCGTCGACCTGTTCTCTACGCTGATGCAG 69055 | || | |||||| || || | | ||| | ||||| || || ||||||| Sbjct 1387 AATGACAACATCCGAAAACAAAGTTTAAAAGCCATTGACCTATTTTCATTAATGATGCAA 1328 Query 69056 GAGCGTGCCTCCACTGGTCGTGTTTATATTGCCAACGTCGACCACATGAACGATCACGGC 69115 || || || || || |||||| | ||||| ||||| |||||| || || || Sbjct 1327 GAACGCGCATCAACCGGTCGTATATATATCCAGAACGTTGACCACTGCAATACGCATAGC 1268 Query 69116 GCATTCGTTCCGGAAATTGCACCGGTACACCAGTCCAATCTCTGTATGGAGATCACGCTA 69175 | || ||| | ||||| || || ||||||||||| | || |||| || || Sbjct 1267 CCGTTTAATCCAGCCATTGCTCCAGTGCACCAGTCCAACTTATGCTTGGAAATTGTCTTA 1208 Query 69176 CCGACCAAGCCACTGGCGTTCACTGACGATCCGAACGGGGAAATCGCGCTTTGCACCCTG 69235 || || || |||||| | | | ||| || || ||||| || ||||| || || Sbjct 1207 CCAACTAAACCACTGCTAGATATTAATGATGAAAATGGCGAAATTGCCCTTTGTACTCTA 1148 Query 69236 TCTGCGTTCAACCTGGGCGCGATCCGCACGCTGGACTCACTGAAAGACGTGGCGTTTTAC 69295 || || ||||| || || || || | ||| || ||| | || | || || Sbjct 1147 TCAGCATTCAATCTCGGTGCCATTGAAAAGCTAGATGATCTGCAGGAGTTAGC----CAC 1092 Query 69296 GCT--GTG-GCG-GCACTGGACTCTCTGCTCGACTATCAGGACTACCCTATGGCTGCTGC 69351 ||| ||| || ||||| || | | || ||||| || || || ||||| | ||||| Sbjct 1091 GCTAGGTGTACGCGCACTAGATGCCTTACTTGACTACCAAGATTATCCTATTCCGGCTGC 1032 Query 69352 AGAAATCCCGGCTAAAGCTCGTCGTAGTCTGGGTATTGGCGTGACCAACTTTGCTTACTA 69411 || |||| | || |||| | | ||||| || || | |||| ||| || || Sbjct 1031 TAAACGTAGTGCTATGGGCCGACGTACTTTAGGTATCGGTGTAATTAACTATGCATATTA 972 Query 69412 TCTGGCGAAGAACGGCTTTAACTACTCTGACGCTGCGGGCAACCAGCTGGTGCATGAGAC 69471 ||| || || || || | ||| ||||| | | | ||| | || |||| | || Sbjct 971 TCTAGCCAAAAATGGTATGCGCTATTCTGATGGTAGCGCTAACGAACTAACGCATCAAAC 912 Query 69472 CTTCGAAGCCATTCAGTACT 69491 || || || || ||||||| Sbjct 911 TTTTGAGGCGATACAGTACT 892 Score = 98.7 bits (108), Expect = 7e-16 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 70306 AAGGAACCTATGTTCCTCGGCCAGTCTGTCAACGTAGCACGCTACGATCAGCAAAAGTAC 70365 ||||| |||||||| | || ||| | || ||| | ||||||| || || ||||| || Sbjct 143 AAGGAGCCTATGTTTTTTGGTCAGCCGGTTAACATTGCACGCTTTGACCAACAAAAATAT 84 Query 70366 CGTGACTTCGAAAAGCTGATTGAAAAACAACTTTCGTTCTTCTGGCGCCCTGAAGAAGTC 70425 || || |||||||| ||||||||||||||||| ||||||||||| || ||||| || Sbjct 83 GGTATTTTTGAAAAGCTAATTGAAAAACAACTTTCTTTCTTCTGGCGTCCAGAAGAGGTG 24 Query 70426 GA 70427 || Sbjct 23 GA 22 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330162374922720