Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_019398.1 Length=178193 Score E Sequences producing significant alignments: (Bits) Value seq66944 208 9e-49 seq66733 95.1 1e-14 >seq66944 Length=5658 Score = 208 bits (230), Expect = 9e-49 Identities = 323/459 (70%), Gaps = 12/459 (3%) Strand=Plus/Minus Query 40683 CTTCTATAACGCAATTTCGGATCGTAAACTGTCATTACCTACGCCTATTATGGCGGGTGT 40742 |||||| | || ||||| | |||| | || || || || || || ||| | ||||| Sbjct 1955 CTTCTACGATGCTATTTCAACTTTTAAAATTTCTTTGCCCACACCAATCATGTCCGGTGT 1896 Query 40743 GCGTACTCCTACGCGTCAGTTCTCCAGTT---GTGTTGTAATCGAATCGGGTGATTCTCT 40799 || || |||| || |||||| |||| | || |||| || || |||||| || Sbjct 1895 ACGCACACCTATTCGCCAGTTC---AGTTCCTGCGTACTAATTGAGTCCGGTGATAGCCT 1839 Query 40800 GGGTTCTCTGAACGCTGTTACGTCCGCGATCGTGAAGTATATCTCTCAACGTGCTGGTAT 40859 | ||| | || || | | || || ||||| ||| | || ||||| |||||||| Sbjct 1838 CGATTCGATTAATGCAACTTCAAGTGCAATTGTGAAATATGTTTCCCAACGGGCTGGTAT 1779 Query 40860 TGGTGTCAACGCCGGACACATTCGCGCTATGGG---TTCAAAAATCCGTGGTGGTGAAGC 40916 ||| | || ||||| | ||||| || |||| ||| | | |||| || ||||| Sbjct 1778 TGGCATTAATGCCGGTCGAATTCGTGCCTTGGGAAGTTCGATA---CGTGACGGCGAAGC 1722 Query 40917 AGTACATACAGGCGTTATCCCGTTCTGGAAACACATTCAGACGGCGGTTAAATCCTGTTC 40976 | ||||| || |||||| || | |||||| ||||||| || |||||||| ||||| Sbjct 1721 TTTTCATACGGGTTGTATCCCATTTTATAAACACTTTCAGACCGCAGTTAAATCTTGTTC 1662 Query 40977 CCAGGGCGGTGTTCGTGGTGGTGCAGCAACCCTGTATTATCCGATCTGGCATCTTGAAGT 41036 || || ||||| || |||||||| ||||| || | ||||| || ||||| | ||||| Sbjct 1661 TCAAGGTGGTGTACGCGGTGGTGCTGCAACACTATTCTATCCAATATGGCACTTGGAAGT 1602 Query 41037 TGAAAACCTGTTGGTTCTGAAAAATAACCGTGGCGTTGAAGAAAACCGTATTCGTCACCT 41096 |||| | |||| |||| |||||||||||||| ||||| |||||| |||||||| | Sbjct 1601 GGAAAGTTTACTGGTCTTGAAGAATAACCGTGGCGTAGAAGATAACCGTGTTCGTCACAT 1542 Query 41097 GGATTATGGCGTACAGCTTAACGATTTGATGTATAAGCG 41135 ||| ||||| || || | || | |||||||| |||| Sbjct 1541 GGACTATGGTGTTCAATTGAATAAACTGATGTATCAGCG 1503 >seq66733 Length=2293 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 49477 TCCGGCCCTTTAGCTTAATTGGTTAGAGCGGGTGACTCATAATCGCGCGGTTGCTGGTTC 49536 || ||||| ||||| | |||||||||| ||||||||||||||| ||| |||||||| Sbjct 549 TCTGGCCCCATAGCTCAGACGGTTAGAGCGTGTGACTCATAATCGCTTGGTCGCTGGTTC 608 Query 49537 AAGTCCAGCAGGGGCCACCAAA 49558 ||||||||| |||||||||||| Sbjct 609 AAGTCCAGCTGGGGCCACCAAA 630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569612492013760