Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_019399.1 Length=167396 Score E Sequences producing significant alignments: (Bits) Value seq66944 185 9e-42 >seq66944 Length=5658 Score = 185 bits (204), Expect = 9e-42 Identities = 296/422 (70%), Gaps = 10/422 (2%) Strand=Plus/Plus Query 138522 CATTAGGTCATTCAGTTGAACGCCATAATCCATATGACGGATACGGTTTTCTTCTACGCC 138581 ||| || | ||||| |||||| ||||| ||||| ||||| | |||||| ||||||||||| Sbjct 1511 CATCAGTTTATTCAATTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCC 1570 Query 138582 TTTGTTATTTTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 138641 |||||| ||||| || || | | |||| |||||||| ||||| || ||||| | Sbjct 1571 ACGGTTATTCTTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAG 1630 Query 138642 AGTAGCAGCGCCGCCACGAATTCCACCCTGTGAGCATGATTTAACTGCAGTCTGAAAATG 138701 || ||||| || || || | ||||| || || || ||||||||||| |||||||| || Sbjct 1631 TGTTGCAGCACCACCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTG 1690 Query 138702 TTTCCAAAAAGGAATAACACCAGTATGGCGTACTTCACCCATGCCAATCTTAGAACCTTC 138761 ||| |||| || ||| ||| ||||| |||| || | || | |||| | | Sbjct 1691 TTTATAAAATGGGATACAACCCGTATGAAAAGCTTCGCC---GTCACGTATCGAACTTCC 1747 Query 138762 ---AGCACGAATCATACCAACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAAC 138818 |||||||| ||| | ||||| ||||| ||||| |||| || | ||||| || Sbjct 1748 CAAGGCACGAATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCAC 1807 Query 138819 AATTGAAGCGGAAGCCTTG--TTGATAGACTTTAATGAATCACCTGCCTCAATAACAACA 138876 ||||| | |||| ||| || || || | | |||||| | |||||| | || Sbjct 1808 AATTGCACTTGAAG--TTGCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTACG 1865 Query 138877 CATGAACTAAACTGTCGAGTCGGAGTACGACAACCAGCCATAATAGGAGTTGGTAATGAA 138936 || ||||| ||||| ||| | || || || ||| | ||| || || || || || ||| Sbjct 1866 CAGGAACTGAACTGGCGAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGAA 1925 Query 138937 AT 138938 || Sbjct 1926 AT 1927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535091007243520