Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq66944 136 9e-27 >seq66944 Length=5658 Score = 136 bits (150), Expect = 9e-27 Identities = 417/638 (65%), Gaps = 10/638 (2%) Strand=Plus/Minus Query 224383 CCAACTCCAATTATGGCTGGACTACGTACTAACACTCGCCAATTTAGTTCTTGCGTAGTT 224442 || || ||||| ||| | || |||| || | |||||| || ||||| |||||| | Sbjct 1918 CCCACACCAATCATGTCCGGTGTACGCACACCTATTCGCCAGTTCAGTTCCTGCGTACTA 1859 Query 224443 ATGAACGTTGGTGATAGTCTAGACAGCATTAGTGCTGGTAACAGTGCTATAATGCAGTAT 224502 || | |||||||| || || |||| ||| | ||||| || || | ||| Sbjct 1858 ATTGAGTCCGGTGATAGCCTCGATTCGATTAATGCAACTTCAAGTGCAATTGTGAAATAT 1799 Query 224503 ATTTCTAAGAAAGCCGGTTTGGGAGTCAACTATGGTCGTGTCCGTGCAGTTGG---TTCA 224559 |||| | || ||| | || | || ||||| | ||||| | || ||| Sbjct 1798 GTTTCCCAACGGGCTGGTATTGGCATTAATGCCGGTCGAATTCGTGCCTTGGGAAGTTCG 1739 Query 224560 GAAATTCGTGGTGGTGATGCTGTTCATACTGGATTGATTCCATTCCTACACGCAGTTGCT 224619 || |||| || || ||| ||||||| || | || ||||| || | || || | Sbjct 1738 ---ATACGTGACGGCGAAGCTTTTCATACGGGTTGTATCCCATTT-TATAAACACTTTCA 1683 Query 224620 AAAA-CTGTTAAATCTTGTTCTCAAGGTGGTGTGCGTGGTGGTGCAGCAACAGTCCACTT 224678 | | |||||||||||||||||||||||||| || |||||||| |||||| | || Sbjct 1682 GACCGCAGTTAAATCTTGTTCTCAAGGTGGTGTACGCGGTGGTGCTGCAACACTATTCTA 1623 Query 224679 CCCATTGTGGCATTACGAGTTTGAAGATCTTGTAGTACTAAAGAATAACAAAGGTACAGA 224738 ||| | ||||| | || | ||| | | | || | ||||||||| || ||| Sbjct 1622 TCCAATATGGCACTTGGAAGTGGAAAGTTTACTGGTCTTGAAGAATAACCGTGGCGTAGA 1563 Query 224739 AG-TATCTCGTGTTCGTCAGTTGGATTATTGTTTCCAAATTAATAAAACTTTCTATCAAC 224797 || || | ||||||||||| |||| ||| || | ||| | |||||| | ||||| | Sbjct 1562 AGATAAC-CGTGTTCGTCACATGGACTATGGTGTTCAATTGAATAAACTGATGTATCAGC 1504 Query 224798 GCTTGATTGAACGTAAAGATATTACTTTCTTCTCTCCAAGTGATGTTCCTGGTTTGTATG 224857 || | | | | | |||||||||| | || ||| ||||| || ||| | || | Sbjct 1503 GCCTACTCCAGGGAAGAGATATTACTCTATTTAGTCCGTCAGATGTGCCAGGTCTATACG 1444 Query 224858 ATGCATTCTGTGCAGACCAAGAAAAATTTGAAAAGCTATACACTAAGTATGAAGCTGATC 224917 ||||||||| ||| || || ||| |||||||| || || || || |||||| || Sbjct 1443 ATGCATTCTTTGCTGATCAGGAAGAATTTGAACTCCTGTATACAAAATATGAAAAAAATG 1384 Query 224918 CAAATATTCGTAAGAAAACTATGCCAGCACTAGAAGTGTTCTCTCAACTAATGAATGAAC 224977 || || || || ||| | | ||| | || | || || | | ||| | |||| Sbjct 1383 ACAACATCCGAAAACAAAGTTTAAAAGCCATTGACCTATTTTCATTAATGATGCAAGAAC 1324 Query 224978 GTTCTGAAACTGGACGTATCTATATCCAGAATATTGAC 225015 | | ||| || ||||| ||||||||||| ||||| Sbjct 1323 GCGCATCAACCGGTCGTATATATATCCAGAACGTTGAC 1286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1146605971134096