Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_019538.1 Length=231743 Score E Sequences producing significant alignments: (Bits) Value seq66944 123 4e-23 seq66893 87.8 3e-12 seq66733 87.8 3e-12 seq66526 84.2 3e-11 >seq66944 Length=5658 Score = 123 bits (136), Expect = 4e-23 Identities = 246/363 (68%), Gaps = 6/363 (2%) Strand=Plus/Plus Query 119939 GTTATTCTTCAATACAAGCAGTTTCTCAACCTCCAAATGCCACATAGGGTAATTCAGAGT 119998 |||||||||||| || || | | || || ||||| ||||| || || || || || Sbjct 1574 GTTATTCTTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAGTGT 1633 Query 119999 AGCAGAGCCGCCACGTAGAGCACCTTGCGAACAGCTCTTAACCGCAGTATGGAAGTGCTT 120058 |||| || || |||| | ||||||| ||||| ||||| || || || ||||| || Sbjct 1634 TGCAGCACCACCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTGTTT 1693 Query 120059 GTAGAATGGGATTACGCCGGTATGGGTTGCTTCGCCGTTGCGAATTGGTGAACCCTCCGC 120118 || |||||||| || ||||| |||||||||| || || | ||| || Sbjct 1694 ATAAAATGGGATACAACCCGTATGAAAAGCTTCGCCGTCACGTATCGAACTTCCCAAGGC 1753 Query 120119 ACGAATAGCACCAGCATTAATACCAATACCAGCACGTTGACTGATATAACTAATAATAGA 120178 |||||| ||| |||||||| ||||||||||| ||||| | ||| | | ||| Sbjct 1754 ACGAATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCACAAT--- 1810 Query 120179 TGCA---GACGTATCGTTAATAGATTTCAGAGAATCGCCGGATTCAATTTTCACACACGA 120235 |||| || || | ||||| || | || ||| ||||| |||||| || || || Sbjct 1811 TGCACTTGAAGTTGCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTACGCAGGA 1870 Query 120236 ACTAAATTGGCGCGTTGGGGTGCGGGCACCACCCAAAATAGGGGTTGGGATTGAAATCTT 120295 ||| || ||||| | || ||||| |||| || || || || || | ||||| || Sbjct 1871 ACTGAACTGGCGAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGAAATTTT 1930 Query 120296 AAA 120298 ||| Sbjct 1931 AAA 1933 >seq66893 Length=3550 Score = 87.8 bits (96), Expect = 3e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 198612 TGCGCTGTTAGCTCAGTTGGATAGAGCAACGTTCTTCTAAAGCGTGGGTCACTGGTTCGA 198671 ||||| ||||||||||||||||||||| | ||||||| ||| |||||| ||||||| Sbjct 1640 TGCGCCCTTAGCTCAGTTGGATAGAGCACCAGCCTTCTAAGCCGTAGGTCACAGGTTCGA 1699 Query 198672 ATCCAGTACGGCGCACCA 198689 |||| ||| ||||||||| Sbjct 1700 ATCCTGTAGGGCGCACCA 1717 >seq66733 Length=2293 Score = 87.8 bits (96), Expect = 3e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 198934 TGGCCCCTTAGCTCAGTTGGTTAGAGCAGCCGACTCATAATCGGTTGGTCACTGGTTCGA 198993 ||||||| |||||||| ||||||||| |||||||||||| |||||| ||||||| | Sbjct 551 TGGCCCCATAGCTCAGACGGTTAGAGCGTGTGACTCATAATCGCTTGGTCGCTGGTTCAA 610 Query 198994 GTCCAGTAGGGGCCACCA 199011 |||||| |||||||||| Sbjct 611 GTCCAGCTGGGGCCACCA 628 >seq66526 Length=1758 Score = 84.2 bits (92), Expect = 3e-11 Identities = 68/81 (84%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 199781 TCGGTGATTAGCGCAG-TTGGTAGCGCGTCTGGTTTGGGACCAGAGGGTCACAGGTTCGA 199839 |||| || |||||||| |||||||||| ||||||||||||||| ||||| |||||||| Sbjct 509 TCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGA 450 Query 199840 GTCCTGTATCACCGACCACTT 199860 |||| | || ||||||| || Sbjct 449 ATCCTCTCTCGCCGACCAATT 429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740829080829760