Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_019708.1 Length=37595 Score E Sequences producing significant alignments: (Bits) Value seq66379 309 7e-80 seq66762 275 2e-69 >seq66379 Length=1582 Score = 309 bits (342), Expect = 7e-80 Identities = 802/1205 (67%), Gaps = 22/1205 (2%) Strand=Plus/Plus Query 4380 TAAAACGGAGATATTATGTCTGATGTAAATGAGATCCTGAAAAAAGTCAGCGCCAGCATT 4439 |||| || || | |||||||||| ||||||| || | || ||||| | || ||| Sbjct 265 TAAACTGGTGACAATATGTCTGATATAAATGAAATATTTAAGAAAGTAACGGCTTCTATT 324 Query 4440 GAAGAGGCGACCGGAAAATTCAACGCGAAAGCAGAAGACGCACTCAAAGAGGCGCAGAAG 4499 ||||| || | | | |||| | ||| | ||||| | || || || || ||||| || Sbjct 325 GAAGAAGCCAGCAGCAAATATAGCGCCCAGGCAGAGAAAGCCCTGAAGGAAGCGCAAAAA 384 Query 4500 TCAGGCAGGCTGTCAGAAGAAACAAAAGCTGCCGTTGATAAAATGGCTTCTGAGTTCAAT 4559 || || || || | |||||| ||||| ||||| ||||||||| | || | ||| Sbjct 385 TCCGGTGAACTTTCTGCAGAAACGAAAGCCGCCGTAGATAAAATGTCGGTCGAACTAAAT 444 Query 4560 GCGCTGCGTGAAGCTGAAAAAACCCTGAAGGCCGCAATGGGCGAACTGGAGCAACATGTT 4619 | | || ||||| |||||||||||||| ||| | | |||||| |||| |||||| || Sbjct 445 ACCTTACGCGAAGCAGAAAAAACCCTGAAAGCCCAAGTTGGCGAAGTGGAACAACATATT 504 Query 4620 GCCCAGATGCCACTGGCCAACGCTGCAAATGTGATCGAGACCGTT-GGCCAGACAGTCA- 4677 ||||| ||||| | ||||| || || ||| | ||| | | || || |||| | Sbjct 505 GCCCAAATGCCCGTTGCCAATGCGTTGAACGTGGT-GAGTTCTATCGGTCA-ACAGGTAG 562 Query 4678 TCAGCAGCGAAGCACTGAAAGCATTCGCGGCAAGCGTGGAAGGCGGTAAGCGCGTCAGCG 4737 | | || | | ||||| | | || || ||||| | |||| || || | | Sbjct 563 TTGGTTTGGAGGTGGTACAAGCACTAGGTTCAGGCATGGAATCCAGTAAACGGGTAATAG 622 Query 4738 TACCGGTGAACGCCGCGCTTATTTCCACGGATGTCGTCACCGGCG-TGGTTGAACCGCAG 4796 ||| | || || || || ||||| ||||||| | || | || | || | || | Sbjct 623 CGCCGATTAATGCTGCCCTGATTTCATCGGATGT-GACAGGGACGATTGTCGCGCCAGAT 681 Query 4797 CGTCTGCCGGGTATCGACACCGCACCGAAACAGCGCCTTTTCATCCGCGATCTGATCGCG 4856 |||| | | || | | ||| ||||| || | || || || ||| | || || Sbjct 682 CGTCAATCCGAAATATTGATCAAACCAAAACAACGGTTGTTTATTCGTGATTTAATTGCC 741 Query 4857 CCTGGCCGCAC-CTCAGCACCGGCCATCTTCTGGGTGCAGCAAACCGGCTTCACCAATGC 4915 |||| || | ||||| | | || | || || |||||| || ||||||||| Sbjct 742 AGTGGCAAGACGCACAGCAACA-CGATTTACTACGTCAAGCAAAAAGGATTCACCAATAA 800 Query 4916 GGCGAAA---GTTGTGCCGGAAGGCACCGCCAAGCCGTACAGCGATATCCAGTTCGCCAC 4972 || || ||||| ||| ||| |||| || || ||| ||| | || | | Sbjct 801 TGCCAAGCCCGTTGTA---GAAAATACCACCAAACCTTATAGCACTATTGAATTTG--AA 855 Query 4973 GCAGATCACG---CCGGTCACCACCATCGCGCACATGTTCAAGGCGTCCAAACAGATTCT 5029 | || ||| || || ||| || || || |||| ||||| ||||| ||||| | Sbjct 856 G-AGGCAACGGTACCTGTTCGCACGATTGCCCATCTGTTTAAGGCATCCAAGCAGATCTT 914 Query 5030 GGATGACTTCGCGCAGCTGCAGTCCACTATCGACGCCGAGATGCGTTACGGACTGAAGTA 5089 |||||| || |||| || ||| |||||| ||| ||||||| || ||||| || Sbjct 915 GGATGATTTTTCGCAACTAGCTTCCCTTATCGATATGGAGTTGCGTTATGGCCTGAAATA 974 Query 5090 TGTGGAAGAACAGGAAATTCTCTTTGGCGACGGTACCGGTGCGCACCTGAAAGGCATCGT 5149 |||||||||||| |||| | || || |||||||| || | ||||||| || || | Sbjct 975 CGTGGAAGAACAGCAAATCTTGTTCGGTGACGGTACAGGCTCAAACCTGAACGGTATTTT 1034 Query 5150 TCCGCAGGCCTCGGCATACGAGGCTGCGTTCGCCGTAGAACAACAGAACGGC-ATCGACG 5208 | ||||| | |||| | | | || || || | |||| || || || | Sbjct 1035 CACTCAGGCTACCGCATTTAAAACGGAATTAAAACCAGCGCAGC-GAACCGCGATTGATG 1093 Query 5209 ATCTGCGCCTCGCAATGCTGCAGGCTCAGCTGGCACGCTTCCCGGCTTCCGGCCACGTCC 5268 |||||||||| || ||||| || || || |||||||| |||| || | ||||| || Sbjct 1094 ATCTGCGCCTTGCCATGCTACAAGCGCAACTGGCACGTATCCCAGCAACAGGCCATGTGT 1153 Query 5269 TGCACTTCATCGACTGGGCGAAGATTGAACTCACCAAAGACACGCTGGGCCGCTATATCC 5328 |||| || | | ||||||| | ||||| || | ||| || |||||||| || ||| ||| Sbjct 1154 TGCATTTTACCAACTGGGCACAAATTGAGCTAATCAAGGATACGCTGGGGCGTTATCTCC 1213 Query 5329 TGGCGAACCCAGCGGCCCTGACTGGCCCTACCCTTTGGGGCCTGCCGGTGGTAGCAACCG 5388 | | || || || || |||||| || || | |||||| | || || || | || | Sbjct 1214 TCTCCAATCCCGCCGCGCTGACTACACCAACATTGTGGGGCTTACCCGTTGTTGTTACAG 1273 Query 5389 AAGCCGCAGCATTCCAGGGCAAGTTCCTGACCGGTGCATTCAACGCTGCGGCACAGCTGT 5448 |||| ||| | | || || || || ||||||| | ||| || || | Sbjct 1274 AAGCTAATCAATTTAAAGATAAATTTATGGTTGGCGCATTCAGTTTAGGGGCGCAACTAT 1333 Query 5449 TTGACCGTGAAGACGCCAACGTGGTGATCTCCACTGAGAACGCCGACGACTTTGAGAAAA 5508 ||||||| ||||| || || ||||||||| |||||| || ||||||| |||||||| | Sbjct 1334 TTGACCGCGAAGAAGCAAATGTGGTGATCAGCACTGAAAATACCGACGATTTTGAGAAGA 1393 Query 5509 ACATGATCTCGATTCGCTGTGAAGAGCGTCTGGCCCTGGCGGTGAAACGCCCTGAGGCGT 5568 |||||||||| ||||| ||||||||||| |||| || ||||| | || || || || | Sbjct 1394 ACATGATCTCTATTCGTTGTGAAGAGCGGTTGGCACTCGCGGTTTACCGTCCCGAAGCCT 1453 Query 5569 TCATC 5573 | ||| Sbjct 1454 TTATC 1458 >seq66762 Length=2443 Score = 275 bits (304), Expect = 2e-69 Identities = 716/1088 (66%), Gaps = 29/1088 (3%) Strand=Plus/Minus Query 2333 GTGGTCACGGCCGATAAAGCCATCCAGCTATCGGCTGTATGGGCATGCGTAAGGCTGTTA 2392 ||||| || | ||||||||| | || || || || || |||||||| ||| | ||||| Sbjct 1138 GTGGTGACAACGGATAAAGCCCTGCAACTTTCTGCGGTCTGGGCATGTGTACGTCTGTTG 1079 Query 2393 AGCGAGTCTATTTCAACCCTTCCGCTGAAAATATACGTTCGACAGCCTGACGGTTCGCGT 2452 || || ||||| || || | ||||| ||| | || || || | || |||||||| Sbjct 1078 AGTGAATCTATATCTACGTTACCGCTCAAACTCTATCACCGTGAGTCAGATGGTTCGCGC 1019 Query 2453 AAAGCGGCAACAG-ATCATCCGGCTTATTCGATACTGTGCCGCCGACCCAATTCAGAAAT 2511 | ||| ||| | || || ||||| | | |||| | || || || ||||| Sbjct 1018 AGCCTCGCA-CAGCAACACCCTACTTATCCTGTCTTGTGTCATCGTCCAAACCTGGAAAT 960 Query 2512 GACACCATCACGCTTTATGTTGATGGTGGTCGCCAGTATTTGCCTACGCGGTAATGCCTT 2571 |||||| ||||| ||||| ||| | || || || | || |||| ||||||||||| Sbjct 959 GACACCTTCACGTTTTATCCAAATGATTGTTGCTAGCTTGTGTTTACGTGGTAATGCCTT 900 Query 2572 TGTCGAGAAGCTGTTTATCGGCAATAAGCTGGTTTCTCTGGTGCCATTGATGCCCCAGAA 2631 ||| || || | ||||| | ||||| ||||| || ||| | | ||||| | Sbjct 899 TGTTGAAAAAAAGAAGATCGGTCAGCGTCTGGTCTCTCTCGTCCCACTATTACCCCAATA 840 Query 2632 CATGGTAGTAAAGCGGCTGGATACCGGGAGGCTGGAATACACCTACACCGAGGACGGCAA 2691 ||| || || ||| |||| ||| | ||||||||| ||| || | ||| ||| Sbjct 839 CATTACCGTTAAACGGGGTGATAATGGGCGACTGGAATACCACTATACTAAAGACACCAA 780 Query 2692 A------------------AAAC---GAGTTATTCCCGAAAAGAACCTGATGCACATCCG 2730 | |||| || ||||| | || || || |||||||||| || Sbjct 779 ACCGGGTTATTCCTCATTAAAACCGCGAATTATTGCAGATAATGACATGATGCACATACG 720 Query 2731 GGGATTTGGCCTTGATGGTGTCTGCGGCATGATGCCAATGATGACAGGTCGTGACGTGAT 2790 |||||| || | || || | |||||||||||||| | | || |||||||| ||| | Sbjct 719 GGGATTCGGATTAGACGGCATTTGCGGCATGATGCCGTTAAAAACGGGTCGTGAGGTGTT 660 Query 2791 CGGCGCGGCGATGGCCGTCGAAGAATCCGCTGCAAAGATTTTCGAAAATGGCCTGCAAAG 2850 ||| | |||||| | ||||| | | || || | |||| | || || || Sbjct 659 TGGCTCCGCGATGTCGCTCGAAACAACTGCAGCGCGGTATTTCCAGAAAGGTATGTCGGC 600 Query 2851 CTCCGGGTTTCTTTCAGCTGACGTGGCGCT-TGATAAGGATCAAAGAGAGCGACTTCGGG 2909 ||||| ||| |||| || | | | | | ||| | ||| | || || || Sbjct 599 ATCCGGTTTTATTTCGTTCGATAAGTTGTTATCAGAAGAA-CAACGTGAAAGATTTAATA 541 Query 2910 GCTATATGCAGGCCTTTACCGGTTCTAAAAACGCCGGAAAAATTATGGTTCTTGAGGGCG 2969 || | | |||| | || || |||| |||| ||| | ||| | || || | || Sbjct 540 AGCATCTTAAAAACTTTGCTGGCTCAGAAAATACCGGCAAAGTGATGTTGCTAGAAGCCG 481 Query 2970 GGCTGAAATATCAGAACGTCACTATGAACCCGGAAGCAGCGCAGATGCTTGA--GTCGCG 3027 | |||||| | | |||| | | || || | | || ||| | || | || | Sbjct 480 GAATGAAATTTAATGGTATCACCCTCGATCCACAAACCTCACAAATGTTGGAAAGCCGTG 421 Query 3028 GTCGTTCAGCATCGAGGAAATCTGCAGATGGTTCCGCGTACCGCCATTTATGGTCGGCCA 3087 || | || |||| ||||||||| | |||| ||||| ||||| ||||||||||| || Sbjct 420 ATCAT--AGTGTCGAAGAAATCTGCCGTTGGTATCGCGTTCCGCCGTTTATGGTCGGTCA 363 Query 3088 CACATCGAAACAGAGCAGCTGGGCATCGAGTCTTGAGGGTATGAACCTCCAGTTCCTGAC 3147 | | ||||| ||||| ||||| || ||| | || || |||||||| ||| | || Sbjct 362 TATTACAAAACAAAGCAGTTGGGCTTCAAGTGTAGAAGGGATGAACCTGATTTTCTTAAC 303 Query 3148 GCACACCCTGCGCCCCCTGCTGGTGAACATAGAGCAGGAAATAGGACGGTGCCTGCTGGA 3207 | || | || ||| | ||||| || || || |||||||| | || || |||||||| Sbjct 302 CAATACATTACGGCCCTTACTGGTCAATATTGAACAGGAAATTGCCCGCTGTCTGCTGGA 243 Query 3208 CAGCGATGATGAGGTTTTCGCGGAGTTCTCTGTAGAAGGACTGCTGCGCGCCGACAGCGC 3267 | || || || ||| ||||| || ||||| ||||||||||| | |||| ||| | Sbjct 242 TAATGACGAGGATTATTTTGCGGAATTTTCTGTTGAAGGACTGCTCAGAACCGATAGCAC 183 Query 3268 GGGCCGTGCTGCGTACTATACCAGTGCGCTCCAGAATGGGTGGATGTCCCGCAATGACGT 3327 ||||| || || || || || | || || || ||||| |||||| |||||||| || Sbjct 182 AGGCCGAGCAGCCTATTACACTACCGCACTACAAAATGGCTGGATGAGTCGCAATGATGT 123 Query 3328 GCGCCGTCTTGAGAATATGCCACCGATTGAAGGGGGTGACATTTACACCGTTCAGCTCAA 3387 | | | || || ||| |||| |||||||| || || ||| | || ||||||||| | || Sbjct 122 GAGGAGACTGGAAAATTTGCCGCCGATTGATGGCGGAGACCTGTATACCGTTCAGTTAAA 63 Query 3388 CCTGACGC 3395 ||| |||| Sbjct 62 CCTAACGC 55 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120086848381968