Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_019909.1 Length=168809 Score E Sequences producing significant alignments: (Bits) Value seq66944 154 2e-32 seq66733 84.2 2e-11 >seq66944 Length=5658 Score = 154 bits (170), Expect = 2e-32 Identities = 284/411 (69%), Gaps = 18/411 (4%) Strand=Plus/Plus Query 146568 TTGAACACCATAATCTAGGTGGCGAATACGGTTTTCATCAACACCTTTATTGTTCTTCAG 146627 |||||||||||| || | ||| |||| |||||| || || || || || ||||||| Sbjct 1526 TTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCCACGGTTATTCTTCAA 1585 Query 146628 TACGAGCAGGTTTTCTACTTCAAGATGCCAAATCGGATAATACAAAGTAGCTGCACCGCC 146687 || || | |||| ||||| | ||||| || ||||| | | || || ||||| || Sbjct 1586 GACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAGTGTTGCAGCACCACC 1645 Query 146688 ACGAATGCCGCCTTGAGAACAAGATTTAACAGAAG-CT--AAGTGAGTTTTCCAGAATGG 146744 || | || |||||||||||||||||||| | | || ||||| ||| | ||||| Sbjct 1646 GCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTG---TTTATAAAATGG 1702 Query 146745 AATAACGCCTGTATGACGAACTTCACCAGCGCCAATCTTAGAACCTTC---AGCACGATA 146801 ||| || |||||| | |||| || | | ||| |||| | | |||||| Sbjct 1703 GATACAACCCGTATGAAAAGCTTCGCCGTCACGTATC---GAACTTCCCAAGGCACGA-- 1757 Query 146802 CATT---CCAGCATTAACACCAATACCGGCACGTTTGCTGATATATTTGATGATTGCTTT 146858 ||| || ||||||| |||||||| || |||| | | |||||| | ||||| | Sbjct 1758 -ATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCACAATTGCACT 1816 Query 146859 GTTTACTGCGTTAATACTGTCAAGACTATCGCCACCTTCAATAACAACGCAAGAACTGAA 146918 ||| ||||| || || ||||| || ||||| | ||||| |||||||| Sbjct 1817 TGAAGTTGCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTACGCAGGAACTGAA 1876 Query 146919 CTGGCGAGTCGGAGTACGTACACCGGCCATAATTGGAGTAGGCAGAGAAAT 146969 ||||||| | || || |||||||||| ||| ||||| || |||| |||||| Sbjct 1877 CTGGCGAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGAAAT 1927 >seq66733 Length=2293 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 74900 TTTGGTGGCCCTTACTGGATTTGAACCAGTGACCAATCGATTATGAGTCGACTGCTCTAA 74959 ||||||||||| ||||| ||||||||| |||||| |||||||||||| ||||||| Sbjct 630 TTTGGTGGCCCCAGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCACACGCTCTAA 571 Query 74960 CCATCTGAGCTAAAGGGCC 74978 || ||||||||| ||||| Sbjct 570 CCGTCTGAGCTATGGGGCC 552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539608823116480