Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq64152 178 8e-39 seq14245 141 6e-28 seq44371 140 2e-27 seq66578 132 3e-25 seq25273 109 4e-18 seq61428 98.7 6e-15 seq54016 98.7 6e-15 seq39072 87.8 1e-11 >seq64152 Length=1479 Score = 178 bits (196), Expect = 8e-39 Identities = 245/339 (72%), Gaps = 19/339 (6%) Strand=Plus/Plus Query 297314 TTACCGGTGTTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATT 297373 ||| || |||||| ||||||||||||||||| ||||||||||| | || ||| |||| Sbjct 71 TTAGCGCTGTTTTTGATTGTTGGTTTGAATCGGGTTCTATGCCATTTGCACAACAACATT 130 Query 297374 ATCCTTTTGAAAATTCCGAA-ATTTTAGACACTTCACAAGATTATATTGCAGATTTTATA 297432 ||| ||||||||| || |||||| | | | ||| | ||| |||||||| Sbjct 131 TTCCATTTGAAAATGAAAAAGATTTTA------TGAATA-ATTTTCCTGCGGATTTTATT 183 Query 297433 ACAGAATCAATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCT 297492 | || |||||||| ||| | |||||||||||||| | ||||| |||| || ||| Sbjct 184 GCTGAGGGCATTGATCAGACACGTGGTTGGTTTTATACGCTCTTAGTAATTTCAACGGCT 243 Query 297493 ATATTTAACAAACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGAT 297552 |||| || || | | ||||||||| |||||| | || | ||| ||||||||| Sbjct 244 TTATTCAATAAGGCGCCTTTTAAAAATTTAATTGCCAATGGTCTGGTTTTAGCAGCTGAT 303 Query 297553 GGACAAAAAATGTCAAAAAGTAAAGGTAATTATCCTGATCC-----AAATATTTTGATGG 297607 ||||| |||||||||||| |||| |||||||| ||||| | || |||| Sbjct 304 GGACAGAAAATGTCAAAACGTAAGAAAAATTATCCAGATCCCATGGAGGTAGTTTG---- 359 Query 297608 ATAAATATGGTGCAGATACTTTACGTCTTTATTT-ATTA 297645 |||||||||||| ||| | |||||| | ||||| |||| Sbjct 360 -TAAATATGGTGCCGATGCATTACGTTTGTATTTGATTA 397 >seq14245 Length=1352 Score = 141 bits (156), Expect = 6e-28 Identities = 281/409 (69%), Gaps = 8/409 (2%) Strand=Plus/Plus Query 474515 TTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATG 474574 || ||||| || || |||| ||||| || |||||| ||| | || || ||| Sbjct 754 TTCGATGCCAAGCGACTGATCGGTCGACGCTTCGATGATGCCAAAATACAGGAAGACATG 813 Query 474575 CGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC--AATAC 474632 |||||||| || |||||||| || | | |||| ||||| | || |||| | | | Sbjct 814 AAACATTGGCCATTCAAGGTGATCAACGATTGTGGCAAACCCAAAATCGAAGTTGAGTTC 873 Query 474633 ACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAA 474692 | |||||||| ||||| || |||| ||| | || ||||||||| | | || | Sbjct 874 AA--AGGTGAAAATAAACGTTTCGCACCCGAAGAGATCAGTTCAATGGTGCTGACAAAGA 931 Query 474693 TGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTT 474751 || ||| ||| || | ||| | || |||| | ||||| || || || || Sbjct 932 TGCGCGAAATCGCTGAAGTT-TATTTGGGTGGTAAAGTGTCCGATGCCGTCATAACAGTG 990 Query 474752 CCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGT 474811 ||||| || || || || ||||||||||| || |||||||| || |||||| || Sbjct 991 CCAGCCTACTTCAACGACAGCCAACGTCAAGCGACCAAAGATGCTGGTTCAATTGCGGGC 1050 Query 474812 CTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGAT 474871 || ||||| |||||||||| |||||||| ||||| || || | || ||||| || ||| Sbjct 1051 CTCAATGTGCTACGTATTATCAATGAACCCACAGCTGCTGCTTTGGCCTATGGGCTGGAT 1110 Query 474872 AAGAATTCTGACA-AAGAAGTAAATGTTTTAATCTTTGATTGTGGAGGT 474919 || |||| ||| | ||| ||||| |||||||| |||| || ||| Sbjct 1111 AAAAATT-TGAAAGGCGAAAAGAATGTGTTAATCTTCGATTTGGGTGGT 1158 >seq44371 Length=3624 Score = 140 bits (154), Expect = 2e-27 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 ||||| | ||| ||||| | ||| ||| || || ||||||||||| | |||| Sbjct 1104 AGACGCAATACTAGATGCAACGTAGATTCCTTTTGAATGTTATAATCAGCCAAGGTTCGT 1163 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 ||||| | ||| || ||||| ||||| | ||||| || ||||| |||||||||||| Sbjct 1164 CCGTCTTCCAATTGTTTGCCAGCGAAAATTAAGCGTTGCTGGTCAGGTGGAATTCCTTCC 1223 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTA 480734 |||||||||||||| ||| ||| |||||||||||| | || | ||||| || Sbjct 1224 TTGTCTTGAATCTTAGCTTTAACATGTTCAATAGTATCCGAAGGTTCAACCTCAAGTGTG 1283 Query 480735 ATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || |||||||| || ||||| ||||| |||||||| Sbjct 1284 ATGGTTTTACCCGTAAGAGTTTTAACAAAAATTTG 1318 >seq66578 Length=1850 Score = 132 bits (146), Expect = 3e-25 Identities = 327/491 (67%), Gaps = 14/491 (3%) Strand=Plus/Minus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 || || ||||||||||| |||||||| |||||||| ||||| | | | | || ||| || Sbjct 1520 AACCCCGATGAAGCTGTCGCATATGGTGCTGCTGTACAAGCCGGTGTACTTTCTGGTGAA 1461 Query 475853 TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTT 475912 | ||| || | || |||||| | |||| || | |||| | | | || || Sbjct 1460 -----CAAGATAC-AGATGCTATTGTTTTACTTGATGTCAATCCATTGACTATGGGCATT 1407 Query 475913 GAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAA 475972 ||||| || || || | ||||| || | ||| | || || ||||||| || Sbjct 1406 GAAACTGTGGGTGGTGTGATGACAAAATTGATTCCACGTAACACCGTTATCCCAACGAAG 1347 Query 475973 AAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTT 476032 ||||| || | || || ||| ||| || || || || |||||||| ||| | | | Sbjct 1346 AAATCGCAAATCTTCTCTACTGCTTCCGACAACCAGCACACGGTAACCATTCAAGTTTAT 1287 Query 476033 GAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAA-GG 476091 ||||||||| | | | || |||||||| | ||||| | || || |||| || Sbjct 1286 GAAGGTGAACGCCCAATGACCAAAGATAACCATTTGCTTGGCAAATTCGAT-TTGACTGG 1228 Query 476092 TATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAA 476151 |||||| || || || | || | || ||||||||||| | ||||| || || || || Sbjct 1227 TATTCCACCAGCGCCTCGTGGTATGCCACAAATTGAAGTGTCCTTTGAAATCGACGCTAA 1168 Query 476152 TGGTATTCTTAATGTTACTGCTTGTGATAA---ATCTAGTAACAAGAGTAAAAATATAAC 476208 |||||||||| | || | |||| || || | | | |||||| |||| || Sbjct 1167 TGGTATTCTTCAAGTGAGTGCTGAAGACAAGGGAACGGGCAACAAG---GAAAAGATTGT 1111 Query 476209 TATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGTATGGTTGATGAAGC 476268 ||||||||| ||| | | || ||| |||| | ||| | |||||| || ||| || Sbjct 1110 TATTACAAATGATCAGAATCGGTTAACTCCAGAAGATATTGATCGTATGATTCGTGATGC 1051 Query 476269 CAAAGAGTTTG 476279 | || |||||| Sbjct 1050 CGAAAAGTTTG 1040 >seq25273 Length=2210 Score = 109 bits (120), Expect = 4e-18 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 |||||||| || || | ||| ||||| ||| || | ||||| || |||||||| Sbjct 1745 CGAAGACGAAGCACCAAATGGAGTGTCGATTCCTTCTGTATGTTATAGTCGGCTAGAGTA 1804 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | || || || ||||| |||||||| || | |||||| ||||| |||||||| || Sbjct 1805 CGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGAGGAATACCC 1864 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAG 480730 ||||| ||||| ||||| || ||| |||||||||||| | || | || ||| | Sbjct 1865 TCCTTATCTTGGATCTTGGCCTTTACATTTTCAATAGTATCGGATGGCTCAA-CTTCTAA 1923 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| || || || | ||||| || |||||||| Sbjct 1924 AGTGATAGTCTTGCCTGTCAATGTCTTGACAAAAATTTG 1962 Score = 86.0 bits (94), Expect = 4e-11 Identities = 113/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| | |||||| ||||| ||||| | |||||||||||| || ||||| ||||| || Sbjct 2038 ATCTTCCAATTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGGGGAATGCCTTCTTT 2097 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA-GTGTGTGAAGTTTCAAGGGTAA 480735 ||||| || || || || || ||||| ||| || | | || ||| ||| | Sbjct 2098 ATCTTGGATTTTAGCCTTTACGTTCTCGATAGTGTCACATGGCTCGACTTCCAA-GGTGA 2156 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | ||||| || || | |||||| ||||| ||||| Sbjct 2157 TGGTTTTGCCAGTCAAAGTCTTCACGAAGATTTG 2190 >seq61428 Length=1331 Score = 98.7 bits (108), Expect = 6e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| | || |||||| | || || || || ||||| | ||||| ||| |||| || Sbjct 624 TGCAGTCGGCATTGATCTTGGCACAACATATTCATGTGTTGGTGTTTTTCAACATGGCAA 683 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| || || || |||||||| || || ||| | || ||||||||||| | || || Sbjct 684 AGTCGATATCATAGCCAATGATCAGGGCAATCGTGTTACTCCATCATATGTGGCCTTCAC 743 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 || || || | | | ||||| ||||| || ||| |||||| || ||||| ||| Sbjct 744 CGATACGGAGCGTTTGATTGGTGATGCAGCCAAAAATCAAGTAGCCATGAATCCGAATAA 803 Query 474508 TACTATTTTTGATG 474521 ||||||||||| || Sbjct 804 TACTATTTTTGGTG 817 >seq54016 Length=2141 Score = 98.7 bits (108), Expect = 6e-15 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 296074 ATTGGAAGATGGATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGGAA 296133 || ||| | ||||||||| || ||||| ||||||||| || || | | ||||||| Sbjct 539 ATGGGACGTTGGATTGATTTTCGAAATGATTATAAAACACTGTATCCATGGTATATGGAA 598 Query 296134 TCTGTTATTTGGTCATTTAAACAACTTTATGAAAAGGAAATGATTTTTGAAGGTTATAAA 296193 || || ||| || |||||||| ||||| || | | | ||| | |||| ||| Sbjct 599 ACTATTTGGTGGGTTTTCAAACAACTCTATGATAAAGGATTAGTTTATCAAGGCGTTAAG 658 Query 296194 GTTATGCCTTATTCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAAAAT 296253 || ||||| ||||| || | ||||| ||| || | ||| |||| || | ||||||| Sbjct 659 GTAATGCCATATTCAACGGCTTGCACGACAGCACTCTCTAATTTCGAATCTGGACAAAAT 718 Query 296254 TATAAAGAGATTATTGATCCAT 296275 |||||||| || | ||||||| Sbjct 719 TATAAAGAAGTTGTGGATCCAT 740 >seq39072 Length=1651 Score = 87.8 bits (96), Expect = 1e-11 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||||||||||||||||| || || || ||| || || | |||||||| || ||| Sbjct 859 GCAATTGGTATTGATTTGGGCACCACCTACTCCTGCGTTGGCGTTTGGCAGAACAACAAA 800 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || || || |||||||| || ||||| ||| | || || || |||||| | |||| Sbjct 799 GTCGAGATCATTGCCAACGATCAAGGCAATCGCACCACGCCCAGTTATGTTGCATTTAAC 740 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCA 474486 || || |||| | | || || ||||| || ||| |||| Sbjct 739 GATACCGAACGTTTAATCGGCGATGCGGCCAAAAATCA 702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3265307303868896