Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_020416.1 Length=160221 Score E Sequences producing significant alignments: (Bits) Value seq66944 176 5e-39 >seq66944 Length=5658 Score = 176 bits (194), Expect = 5e-39 Identities = 327/476 (69%), Gaps = 12/476 (3%) Strand=Plus/Plus Query 133783 CATCAAATCATTGATTTGCAGACCGTAATCTAGATGACGAATGCGGTTTTCATCTACACC 133842 ||||| | ||| | ||| | ||| || || | ||||||| ||||| || ||||| || Sbjct 1511 CATCAGTTTATTCAATTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCC 1570 Query 133843 TTTGTTGTTCTTTAATACCAACAGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAG 133902 ||| ||||| || |||| | |||| || || | ||||| |||||||| | || Sbjct 1571 ACGGTTATTCTTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAG 1630 Query 133903 AGTAGCTGCACCACCACGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATG 133962 || || |||||||| |||||||| ||||||||||||||||| ||||| |||||||| || Sbjct 1631 TGTTGCAGCACCACCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTG 1690 Query 133963 TTTCCAGAAAGGAATTACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTC 134022 ||| | || || || || ||||| ||||||| | || | | || | | | Sbjct 1691 TTTATAAAATGGGATACAACCCGTATGAAAAGCTTCGCCGT---CACGTATCGAACTTCC 1747 Query 134023 ---AGCTCGAATCATACCGGCGTTGATGCCGATACCAGCTCGCTTGCTGATATACTTAAT 134079 || ||||| |||||| || ||||| |||||||| || | | | ||| || | Sbjct 1748 CAAGGCACGAATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCAC 1807 Query 134080 AATACTGTTACTT---GCCGCATTAATAGAATTCAGTGAATCGCCAGCTTCAATAACTAC 134136 ||| || |||| | |||||||| |||| || ||| || | ||||| | ||| Sbjct 1808 AAT--TG-CACTTGAAGTTGCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTAC 1864 Query 134137 ACAAGAACTAAACTGACGAGTAGGAGTACGAGCCCCTGCCATAATCGGTGTAGGCAATGA 134196 || ||||| ||||| ||| |||| || || | || | ||| || ||||| ||||| || Sbjct 1865 GCAGGAACTGAACTGGCGAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGA 1924 Query 134197 AATCTGGCGAGTAGATACAGCATCATAAAAACGAATAATATGAGCCAGACGATTTT 134252 ||| | ||| || | |||||| || || || | | || | | || ||| ||| Sbjct 1925 AATTTTAAAAGTTGAAATAGCATCGTAGAAGCGCTTTACATAATCGAGGCGAGTTT 1980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512150222467520