Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq65063 89.7 6e-13 >seq65063 Length=1025 Score = 89.7 bits (98), Expect = 6e-13 Identities = 262/402 (65%), Gaps = 10/402 (2%) Strand=Plus/Plus Query 14387 AAAGTGATGTATGCTTGCTTCCATAAGAATCTCAAGGATGAAATGAAGGTGGCACAACTG 14446 ||||| |||| | | |||||| | ||| ||| ||| | || ||||||||| || Sbjct 357 AAAGTTATGTTTACATGCTTCAAACGTAATGACAAACGCGAAGTTAAAGTGGCACAATTG 416 Query 14447 GCGGCATATGTCGCGGACAAGTCTGCGTACCACCATGGTGAAGTATCCTTAGCGGACACG 14506 | | | || || || | |||||| || || || |||||| | || ||| || Sbjct 417 TCCGGTTCAGTGGCTGAAATGTCTGCTTATCATCACGGTGAAATGTCATTACAATCTACA 476 Query 14507 ATTGTTAAGTTGGCAAACGACTACACGGGTTCAAACAACATTAACCTTCTTGAACCGTGT 14566 |||||||| || || | | || ||||||||||||||||| | || ||||| | Sbjct 477 ATTGTTAATTTAGCGCAAAATTATGTTGGTTCAAACAACATTAATTTACTAGAACCACGC 536 Query 14567 GGTCAATTTGGTACGCGTCTCATGGGTGGTAAGGATGCTTCTCAGACGAGGTACATTTTC 14626 |||||||| ||||||||||| ||||| || ||| | || | | || |||||| Sbjct 537 GGTCAATTCGGTACGCGTCTACAAGGTGGCAAAGATTGTGCTAGTGCTCGTTATATTTTC 596 Query 14627 ACA--AAACTTACC---AAGGAGGCTCGCAAGATCTTTGATCCTCGGGATGACCCGATCC 14681 ||| | | ||| || | ||||| || || |||| ||||| || | Sbjct 597 ACATTGATGTCACCATTAACGCGGCTC-----ATATTCCATCCATCTGATGATCCATTAT 651 Query 14682 TCAACTACTTGGACGATGATGGACGCTCCATTGAACCAGACTTTTACATGCCAACTTTAC 14741 | | ||| | |||||||| | ||||||||| | | || |||||| | ||| Sbjct 652 TGACGTACGAAGTTGATGATGGTCAAAAGATTGAACCACAATGGTATGTGCCAATTATAC 711 Query 14742 CAATGGTTCTCGTGAATGGAACCGAGGGTATCGGTACGGGTT 14783 | ||||| | |||||||| | || ||||| || || |||| Sbjct 712 CGATGGTATTAGTGAATGGTGCTGATGGTATTGGCACAGGTT 753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596070330901760