Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_021073.1 Length=107218 Score E Sequences producing significant alignments: (Bits) Value seq66944 482 2e-131 seq66611 197 9e-46 >seq66944 Length=5658 Score = 482 bits (534), Expect = 2e-131 Identities = 1098/1626 (68%), Gaps = 32/1626 (2%) Strand=Plus/Minus Query 9236 ACATTTGAAATCTCCCTCCCGACACCAATCATGTCTGGTGTTCGTACACCGACCCGCCAA 9295 || ||| |||| || | || |||||||||||||| ||||| || ||||| | ||||| Sbjct 1936 ACTTTTAAAATTTCTTTGCCCACACCAATCATGTCCGGTGTACGCACACCTATTCGCCAG 1877 Query 9296 TTCAGCTCATGCGTAAAAATCGAAAGCGGTGATAGCCTAAAATCAATCAATGCAACATCA 9355 ||||| || |||||| ||| || |||||||||||| | || || |||||||| ||| Sbjct 1876 TTCAGTTCCTGCGTACTAATTGAGTCCGGTGATAGCCTCGATTCGATTAATGCAACTTCA 1817 Query 9356 GGCGCAATCGTGAGTTACGTTTCACAGCGTGCAGGTATTGGCATTAACGCGGGTCGTATC 9415 | ||||| |||| || ||||| || || || |||||||||||||| || ||||| || Sbjct 1816 AGTGCAATTGTGAAATATGTTTCCCAACGGGCTGGTATTGGCATTAATGCCGGTCGAATT 1757 Query 9416 CGAGCATTAGGTTCTGAGATTCGTGGTGGTGAAGCGGTACATACTGGTTGTATCCCATTC 9475 || || || || | ||| |||| || ||||| | ||||| |||||||||||||| Sbjct 1756 CGTGCCTTGGGAAGTTCGATACGTGACGGCGAAGCTTTTCATACGGGTTGTATCCCATTT 1697 Query 9476 TACAAACACTTCCAAACAGCAGTGAAATGTTGTAGCCAAGGCGGTGTTCGTGGCGGCGCG 9535 || |||||||| || || ||||| |||| |||| ||||| ||||| || || || || Sbjct 1696 TATAAACACTTTCAGACCGCAGTTAAATCTTGTTCTCAAGGTGGTGTACGCGGTGGTGCT 1637 Query 9536 GCAACGGTATTCTACCCAATGTGGCACCTAG-AGTACAAATCACTAATCGTACTCAAGAA 9594 ||||| ||||||| ||||| |||||| | | ||| ||| || | || | ||||| Sbjct 1636 GCAACACTATTCTATCCAATATGGCACTTGGAAGTGGAAA-GTTTACTGGTCTTGAAGAA 1578 Query 9595 CAACCGTGGTATCGAAGAAAACCGTGTACGTCATATGGACTACGGTGTACAAATTAATGG 9654 |||||||| | ||||| |||||||| ||||| |||||||| ||||| ||| | ||| Sbjct 1577 TAACCGTGGCGTAGAAGATAACCGTGTTCGTCACATGGACTATGGTGTTCAATTGAATAA 1518 Query 9655 CCTGATGTATAAGCGTCTGCTGTCTGGTCAGA-ACATCACTTTATTCTCACC-TCATAGT 9712 ||||||||| |||| || || | || ||| | || ||| |||| || ||| | | Sbjct 1517 ACTGATGTATCAGCGCCTACT-CCAGGGAAGAGATATTACTCTATTTAGTCCGTCAGA-T 1460 Query 9713 GTACCGGGTCTATACGATGCATACTTCGAAGACCAAGATAAGTTCGAGCGACTGTACACC 9772 || || |||||||||||||||| ||| | || || || | || || | ||||| || Sbjct 1459 GTGCCAGGTCTATACGATGCATTCTTTGCTGATCAGGAAGAATTTGAACTCCTGTATACA 1400 Query 9773 AAAGCGGAATCTGAT-CCATCAATCGAAAAAGACACAATCT--CTGCTAAGGAAGCATTC 9829 ||| ||| || || || ||||| ||| | | | || | || ||| Sbjct 1399 AAATATGAAAAAAATGACAACATCCGAAA---ACAAAGTTTAAAAGCCATTGACCTATTT 1343 Query 9830 AGCATACTAATGCAAGAGCGTGCTTCTACAGGTCGCATCTACATTCAGCACGTAGATCAC 9889 || | |||||||| || || || || ||||| || || || ||| |||| || ||| Sbjct 1342 TCATTAATGATGCAAGAACGCGCATCAACCGGTCGTATATATATCCAGAACGTTGACCAC 1283 Query 9890 TGTAACATTAACGGTCCTTTCGAT-GAGCGCGTTGCACCAGTACGCCAATCAAACCTATG 9948 || || | | | || || || ||| | |||| ||||| | ||| || ||| |||| Sbjct 1282 TGCAATACGCATAGCCCGTTTAATCCAGC-CATTGCTCCAGTGCACCAGTCCAACTTATG 1224 Query 9949 TATGGAAATCGCACTACCAACCAAACCGTTGAATAACGTCGATGATCCTGATGGTGAAGT 10008 ||||||| | ||||||| ||||| || | | ||||| |||| ||| | Sbjct 1223 CTTGGAAATTGTCTTACCAACTAAACCACTGCTAGATATTAATGATGAAAATGGCGAAAT 1164 Query 10009 TGCGCTATGTACTCTATCTGCATTCAACTTGGGTAAGATTGAATCGGTTGGTGATTTTGA 10068 ||| || ||||||||||| |||||||| | ||| |||||| | | | |||| | | Sbjct 1163 TGCCCTTTGTACTCTATCAGCATTCAATCTCGGTGCCATTGAAAAGCTAGATGATCTGCA 1104 Query 10069 -GCGTCTGTCTCGTATCGTTGTGCGTGCATTGGATAATCTGTTAGACTACCAAAACTACC 10127 | || | | || | | ||| || ||| | ||| | | ||||||||| | || | Sbjct 1103 GGAGTTAGCCACG-CTAGGTGTACGCGCACTAGATGCCTTACTTGACTACCAAGATTATC 1045 Query 10128 CATTACCTGCCGCAGAACGTTCGACAATGCGCAGACGTAGCCTTGGTGTAGGTATTATCA 10187 | | || || || ||||| | ||| || |||||| | ||| | ||| | || | Sbjct 1044 CTATTCCGGCTGCTAAACGTAGTGCTATGGGCCGACGTACTTTAGGTATCGGTGTAATTA 985 Query 10188 ATTACGCCCACTGGGTGGCTAAGAATGGCCTAAAATACAGTGACGGTAGCGCAAAC-AAC 10246 | || || | | | || || ||||| | || ||| |||||||| ||| ||| Sbjct 984 ACTATGCATATTATCTAGCCAAAAATGGTATGCGCTATTCTGATGGTAGCGCTAACGAAC 925 Query 10247 AAGACGCATGAGCTGATTGAAGCTATGCAGTTCTACTTGCTACAAGCATCAATGGAACTG 10306 | |||||| | |||| || || |||| || ||| | | ||| || | || ||| Sbjct 924 TA-ACGCATCAAACTTTTGAGGCGATACAGTACTGGTTGTTGCGAGCGTCTAACGAGCTG 866 Query 10307 GCTAAAGAGAAGGGTATGTGTTCTGGATTCGAAGACACTAAGTATGCCAAAGGTGTTATG 10366 || | || |||| || | | ||| | || |||| |||| || |||| || || Sbjct 865 GCAATGGAACGGGGTGCTTGCCCATGGTTCAATGAAACTAGGTATTCCCAAGGGATTCTG 806 Query 10367 CCAGTTGATCGTTATAAGTCTGATGTCGACAACACCCACACAGCAGAACTACAGATGAAT 10426 || ||||| ||||| ||||| |||| | | || || || | || | Sbjct 805 CCCATTGATACCTATAAAAAAGATGTAGACACTATCAGCAATACACCGCTTCTTTTGGAC 746 Query 10427 TGGAATTGGTTGCG-TAATGAGATT---GTCCATAATGGCCTACGTAACTCTACTCTATC 10482 ||| | | || ||| | ||| ||| | || |||||||||||||||||||| Sbjct 745 TGGGAAGAACTACGCGAATCA-ATTAAAGTC---TACGGTCTACGTAACTCTACTCTATC 690 Query 10483 TGCATTCATGCCTTCGGAAACATCTTCTCAGGTATCTAACGCAACAAACGGCATCGAACC 10542 |||| | |||||||| |||||||| || ||| |||||||||| || || || || ||||| Sbjct 689 TGCACTGATGCCTTCTGAAACATCATCGCAGATATCTAACGCGACCAATGGTATTGAACC 630 Query 10543 ACCTCGTGGCTACATGTCAG---TTAAGCAGTCGAAGGATGGCATCTTAAAACAAATCGT 10599 ||||||||| ||| |||| | ||||| || || |||||||| | ||| |||| Sbjct 629 ACCTCGTGG--TCATATCAGCATTAAAGCA-TCAAAAGATGGCATTCTTCGCCAAGTCGT 573 Query 10600 ACCGGGTTATGATAAATACAAAGACCAATACGAGTTACTATGGAATATCAAAGACAACAC 10659 ||||| ||||| ||||| || || | || ||| |||| | | || Sbjct 572 ACCGGAATATGAGCGTCTAAAAGATAGTTATGAAATGCTGTGGGATATGCCAAATAATGA 513 Query 10660 TGGTTACTTGGAATTGGTTGCCATCATGCAGAAGTTTGTGGATCAGGCTATTTCAGCAAA 10719 |||||| || | |||||| | |||||||||||| | ||||| || |||||| | || Sbjct 512 TGGTTATTTACAGCTGGTTGGTCTGATGCAGAAGTTTATCGATCAAGCAATTTCATCTAA 453 Query 10720 CACTAACTACGACCCAGAAAACTACCCAGAAAGTAAGGTTCCAATCAAAAAGTTATTGCA 10779 |||||||| || ||| || | |||| || ||||| ||| | || | | Sbjct 452 TACTAACTATGATCCAATGCGCTTTGTTAATGGTAAAGTACCAATGAAACAACTACTTAA 393 Query 10780 AGATTTGGTGACATGTTATAGACTCGGCATCAAGACACTGTACTACCACAACACACGAGA 10839 |||| || | || |||| | ||| | || || |||||||| || || || || || Sbjct 392 AGATCTGCTTACTGCCTATAAGTTTGGCGTAAAAACTCTGTACTATCAAAATACCCGGGA 333 Query 10840 TGGTGC 10845 |||||| Sbjct 332 TGGTGC 327 Score = 111 bits (122), Expect = 1e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 10934 CAAACAAAAAACGACCAACTGAAGGAGCCGATGTTCTTCGGCCAATCAGTTAACGTATCC 10993 |||| ||||| ||||| || |||||||| ||||| || || || | |||||| | | Sbjct 164 CAAAATAAAAATGACCAGCTAAAGGAGCCTATGTTTTTTGGTCAGCCGGTTAACATTGCA 105 Query 10994 CGTTACGACCAACAGAAACATGATGTTTTTGAGAAACTAACTCAGAAGCAACTATCATTC 11053 || | |||||||| ||| ||| | ||||||| || |||| | | || ||||| || ||| Sbjct 104 CGCTTTGACCAACAAAAATATGGTATTTTTGAAAAGCTAATTGAAAAACAACTTTCTTTC 45 Query 11054 TTCTGGCGTCCCGAAGAAGTTGATGTGTC 11082 ||||||||||| ||||| || ||||| || Sbjct 44 TTCTGGCGTCCAGAAGAGGTGGATGTATC 16 >seq66611 Length=1920 Score = 197 bits (218), Expect = 9e-46 Identities = 361/527 (69%), Gaps = 10/527 (2%) Strand=Plus/Minus Query 11468 TGCATGATGGCTGTTAATGTATTAGAAGCAGTTCGTTTCTACGTTAGTTTCGCTTGTTCA 11527 ||| | ||| |||||||| ||||||| | ||||| ||||| ||||| || ||||| Sbjct 1872 TGCCTTATGAGTGTTAATGCGCTAGAAGCGATACGTTTTTACGTAAGTTTTGCCTGTTCT 1813 Query 11528 TTTGCATTCGCTGAACGCGAGATTATGGAAGGTAATGCTAAAATCATCAAGCTTATTGCT 11587 || || || || || || || |||||||||||||||||||||| || || |||||||| Sbjct 1812 TTCGCTTTTGCAGAGCGTGAACTTATGGAAGGTAATGCTAAAATAATTAAACTTATTGCC 1753 Query 11588 CGTGATGAAGCACTACACCAAAGCGGTACACAGCACATGCTGAAGATGTGGAACAACGGC 11647 ||||| ||||| ||||| || ||| || ||||| || | || | | ||| Sbjct 1752 CGTGACGAAGCGTTACACTTAACCGGAACTCAGCATATTTTAAACTTACTACGTAGTGGC 1693 Query 11648 ACCGATGATATGGAAATGGCTTCTATCGCACATGAGTGTCGCGAAGAGTCAATCGAAATA 11707 |||||| |||||||||| || || | || |||||| | || | | || Sbjct 1692 GAAGATGATCCGGAAATGGCTAAAATTGCCAAAGAATGTCGCCATGAATGTTATAATATG 1633 Query 11708 TTCAAGATGGCCGAAGAACAAGAGAAAGACTGGGCAAACTATCTATTCAAAGATGGTGGT 11767 ||| | || | || || || ||||| |||||| | ||| | |||| || ||| | Sbjct 1632 TTCGTTTTAGCAGCTGAGCAGGAAAAAGAATGGGCAGAATATTTGTTCAGTGACGGTTCT 1573 Query 11768 ATGATCGGACTAAACAAAGATATTCTATGTGAATATGTTGAGTACATCACAAGCCACCGA 11827 ||||| || || || || ||||||||||| | ||| ||||||| ||||| | ||| Sbjct 1572 ATGATAGGTCTGAATAAGGATATTCTATGGCAGTATATTGAGTATATCACTAATATCCGC 1513 Query 11828 ATGAAGTATGTCGGGCT--ACCTCCGCT---ACACCCGGAAGCAACTAACCCAATCCCAT 11882 ||||| |||| || | || | || | ||||| | | ||||||||||| | Sbjct 1512 ATGAATGCAGTCGATCTTGATCTACCCTTCAAGACCCG-----ATCAAACCCAATCCCTT 1458 Query 11883 GGATCAACAACTGGTTGGTTAGTGATAATGTTCAAGTTGCTCCACAGGAAGCCGAGATTA 11942 |||| || ||| | || ||||||||| |||||||| |||||||||| || ||| Sbjct 1457 GGATTAATTCTTGGCTAGTCTCTGATAATGTGCAAGTTGCACCACAGGAAGTTGAAGTTA 1398 Query 11943 GTTCATACCTAACCGCACAAGTTGACTCGGACATCAGTGATGATGAT 11989 | || || | || ||| |||| || || |||||| |||||| Sbjct 1397 GCTCCTATTTGGTCGGACAGATTGATTCTGAAGTCAGTGCCGATGAT 1351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 342692941912088