Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq25273 127 4e-24 >seq25273 Length=2210 Score = 127 bits (140), Expect = 4e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| |||| ||| | ||| | || || || |||||||||| || || | Sbjct 1751 CGAAGCACCAAATGGAGTGTCGATTCCTTCTGTATGTTATAGTCGGCTAGAGTACGTCCG 1810 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | || || || ||||| ||||| | || ||||| ||||| || || || ||| Sbjct 1811 TCCTCCAGCTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGAGGAATACCCTCCTTA 1870 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || |||| |||| |||| |||||||||||| | ||||||||||| ||| ||| Sbjct 1871 TCTTGGATCTTGGCCTTTACATTTTCAATAGTATCGGATGGCTCAACTTCTAAAGTGATA 1930 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| | || || ||||| |||||||| Sbjct 1931 GTCTTGCCTGTCAATGTCTTGACAAAAATTTGCAT 1965 Score = 107 bits (118), Expect = 3e-18 Identities = 166/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | ||| || || |||| || | |||| ||| || || || Sbjct 1957 AATTTGCATACCACCACGCAAGCGGAGGACCAAGTGAAGGGTAGACTCCTTTTGGATGTT 2016 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||||| || | | ||| || ||||| || || || |||||||| | ||||| Sbjct 2017 GTAGTCGGACAAGGCACGGCCATCTTCCAATTGCTTGCCAGCGAAAATTAAACGTTGTTG 2076 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || || |||||||||||||| ||||| | |||| || ||||| || | Sbjct 2077 ATCTGGGGGAATGCCTTCTTTATCTTGGATTTTAGCCTTTACGTTCTCGATAGTGTCACA 2136 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| ||||| | || || ||||| || || | || || || || |||||||| Sbjct 2137 TGGCTCGACTTCCAAGGTGATGGTTTTGCCAGTCAAAGTCTTCACGAAGATTTGCAT 2193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 898901479232640