Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq44371 163 6e-35 seq25273 100 6e-16 >seq44371 Length=3624 Score = 163 bits (180), Expect = 6e-35 Identities = 178/232 (77%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGA 192368 || ||||| ||||| ||||||| ||| || |||| || ||| || || |||||||||| Sbjct 1095 CCTCCTCTGAGACGCAATACTAGATGCAACGTAGATTCCTTTTGA-ATGTTATAATCAGC 1153 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || |||||| | || ||||||||||| ||||| || ||||| | || || |||||||| Sbjct 1154 CAAGGTTCGTCCGTCTTCCAATTGTTTGCCAGCGAAAATTAAGCGTTGCTGGTCAGGTGG 1213 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTT--ATAGAATCTGACGATTCT 192486 |||||||| || ||||| || ||| ||| |||| ||| |||| ||| || | ||| Sbjct 1214 AATTCCTTCCTTGTCTTGAATCTTAGCTTTAACAT--GTTCAATAGTATCCGAAGGTTCA 1271 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT 192538 || || || || ||||||||||| || | ||||||| ||| || ||||||| Sbjct 1272 ACCTCAAGTGTGATGGTTTTACCCGTAAGAGTTTTAACAAAAATTTGCATTT 1323 >seq25273 Length=2210 Score = 100 bits (110), Expect = 6e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | | || | || || || | |||| ||| || ||| || || || Sbjct 1964 ATACCACCACGCAAGCGGAGGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCG 2023 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || | || |||| |||||||| || ||||| || ||||| | |||||||| || Sbjct 2024 GACAAGGCACGGCCATCTTCCAATTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGG 2083 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| |||||| ||||| || |||| || | | || Sbjct 2084 GGAATGCCTTCTTTATCTTGGATTTTAGCCTTTACGTTCTCGATAGTGTCACATGGCTCG 2143 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || |||||||| ||||| || || || | || || ||||| Sbjct 2144 ACTTCCAAGGTGATGGTTTTGCCAGTCAAAGTCTTCACGAAGATTTGCAT 2193 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || ||||| || | || || ||| | || |||| || || |||||||||||||| | Sbjct 1784 ATGTTATAGTCGGCTAGAGTACGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATTAAACGT 1843 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || ||||| || || || || || |||||||| || || |||||||| |||| | Sbjct 1844 TGCTGATCTGGAGGAATACCCTCCTTATCTTGGATCTTGGCCTTTACATTTTCAATAGTA 1903 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || || | || ||||||| ||| || || || || || ||||| || | ||| || ||| Sbjct 1904 TCGGATGGCTCAACTTCTAAAGTGATAGTCTTGCCTGTCAATGTCTTGACAAAAATTTGC 1963 Query 192535 AT 192536 || Sbjct 1964 AT 1965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 983635490905200