Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq44371 163 5e-35 seq25273 100 5e-16 >seq44371 Length=3624 Score = 163 bits (180), Expect = 5e-35 Identities = 176/231 (76%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 || ||||| || || ||||||| ||| || |||| || || ||| |||||||| | Sbjct 1095 CCTCCTCTGAGACGCAATACTAGATGCAACGTAGATTCCTTTTGAATGTTATAATCAGCC 1154 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 || | |||| |||| ||||||||||| ||||| |||||||| | || ||||||||||| Sbjct 1155 AAGGTTCGTCCGTCTTCCAATTGTTTGCCAGCGAAAATTAAGCGTTGCTGGTCAGGTGGA 1214 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTT--ATAGTATCTGACGATTCTA 172020 |||||||| || ||||| || ||| ||| |||| ||| |||||||| || | ||| | Sbjct 1215 ATTCCTTCCTTGTCTTGAATCTTAGCTTTAACAT--GTTCAATAGTATCCGAAGGTTCAA 1272 Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTT 172071 | || || || ||||||||||| || | ||||||| || || ||||||| Sbjct 1273 CCTCAAGTGTGATGGTTTTACCCGTAAGAGTTTTAACAAAAATTTGCATTT 1323 >seq25273 Length=2210 Score = 100 bits (110), Expect = 5e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || |||||||| || ||||| |||||||| | ||||| || || || || ||||||||| Sbjct 2039 TCTTCCAATTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGGGGAATGCCTTCTTTA 2098 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| |||||| ||||| || ||||| || | | || ||||| | || ||| Sbjct 2099 TCTTGGATTTTAGCCTTTACGTTCTCGATAGTGTCACATGGCTCGACTTCCAAGGTGATG 2158 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| ||||| || || || | ||| || ||||| Sbjct 2159 GTTTTGCCAGTCAAAGTCTTCACGAAGATTTGCAT 2193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904378491681600