Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_021344.2 Length=176227 Score E Sequences producing significant alignments: (Bits) Value seq66944 210 2e-49 >seq66944 Length=5658 Score = 210 bits (232), Expect = 2e-49 Identities = 320/453 (71%), Gaps = 12/453 (3%) Strand=Plus/Minus Query 41618 TTCTACAACGCAATTTCGGATCGTAAGCTGTCGTTACCTACGCCTATTATGGCTGGTGTG 41677 |||||| | || ||||| | ||| | || || || || || || ||| | ||||| Sbjct 1954 TTCTACGATGCTATTTCAACTTTTAAAATTTCTTTGCCCACACCAATCATGTCCGGTGTA 1895 Query 41678 CGTACTCCTACGCGTCAGTTTTCCAGTT---GCGTAGTGATTGAATCAGGTGATTCACTG 41734 || || |||| || ||||| ||||| ||||| | ||||| || |||||| || Sbjct 1894 CGCACACCTATTCGCCAGTT---CAGTTCCTGCGTACTAATTGAGTCCGGTGATAGCCTC 1838 Query 41735 GGTTCTCTGAATGCTGTAACCTC---TGCGATCGTGAAGTATATTTCACAACGTGCTGGT 41791 | ||| | ||||| ||| || ||| || ||||| ||| |||| ||||| |||||| Sbjct 1837 GATTCGATTAATGC---AACTTCAAGTGCAATTGTGAAATATGTTTCCCAACGGGCTGGT 1781 Query 41792 ATCGGTGTAAACGCCGGACATATTCGCGCGATGGGTTCTAAAATCCGTGGTGGTGAAGCA 41851 || || | || ||||| | ||||| || |||| | || |||| || ||||| Sbjct 1780 ATTGGCATTAATGCCGGTCGAATTCGTGCCTTGGGAAGTTCGATACGTGACGGCGAAGCT 1721 Query 41852 GTTCATACAGGCGTGATCCCGTTCTGGAAACATATTCAGACAGCGGTTAAATCCTGTTCA 41911 ||||||| || ||||| || | ||||| ||||||| || |||||||| ||||| Sbjct 1720 TTTCATACGGGTTGTATCCCATTTTATAAACACTTTCAGACCGCAGTTAAATCTTGTTCT 1661 Query 41912 CAAGGTGGTGTTCGTGGTGGTGCTGCAACGTTGTATTATCCGATCTGGCATTTGGAAGTT 41971 ||||||||||| || |||||||||||||| | | ||||| || ||||| |||||||| Sbjct 1660 CAAGGTGGTGTACGCGGTGGTGCTGCAACACTATTCTATCCAATATGGCACTTGGAAGTG 1601 Query 41972 GAAAACCTGCTGGTTCTGAAAAACAACAAAGGTGTTGAAAACAACCGTATCCGTCACCTG 42031 |||| | ||||| |||| || ||| || || ||| | |||||| | |||||| || Sbjct 1600 GAAAGTTTACTGGTCTTGAAGAATAACCGTGGCGTAGAAGATAACCGTGTTCGTCACATG 1541 Query 42032 GATTATGGCGTACAGCTTAACGATTTGATGTAT 42064 || ||||| || || | || | |||||||| Sbjct 1540 GACTATGGTGTTCAATTGAATAAACTGATGTAT 1508 Score = 84.2 bits (92), Expect = 2e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 43395 TTGCCCGATATGAAGAACAAAAACACAGTGTATTTGAAAAGCTGACTGAAAAACAACTGT 43454 |||| || | ||| |||||||| | || | ||||||||||| | |||||||||||| | Sbjct 109 TTGCACGCTTTGACCAACAAAAATATGGTATTTTTGAAAAGCTAATTGAAAAACAACTTT 50 Query 43455 CATTCTTCTGGCGACCGGAAGAAGTGGAT 43483 | ||||||||||| || ||||| |||||| Sbjct 49 CTTTCTTCTGGCGTCCAGAAGAGGTGGAT 21 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563326557119040