Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_021772.1 Length=72394 Score E Sequences producing significant alignments: (Bits) Value seq66893 82.4 4e-11 seq66838 82.4 4e-11 >seq66893 Length=3550 Score = 82.4 bits (90), Expect = 4e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 68162 CCTTAGCTCAGCAGGATAGAGCAGTAGCCTTCTAAGCTATTGGTCACTGGTTCGAATCCA 68221 ||||||||||| |||||||||| |||||||||||| | |||||| ||||||||||| Sbjct 1645 CCTTAGCTCAGTTGGATAGAGCACCAGCCTTCTAAGCCGTAGGTCACAGGTTCGAATCCT 1704 Query 68222 GTAGGGTGTACCA 68234 |||||| | |||| Sbjct 1705 GTAGGGCGCACCA 1717 >seq66838 Length=2930 Score = 82.4 bits (90), Expect = 4e-11 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 68244 TGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCTTATAGCT-GTACGAGTTC 68302 ||||||||| ||||||||||||||||||||||||||||| ||| ||| | || || |||| Sbjct 1421 TGGTGAAATTGGTAGACACAAGGGATTTAAAATCCCTCGACTT-TAGGTCGTGCGGGTTC 1363 Query 68303 GAGTCTCGTTACTCCCACCAAA 68324 ||||| || | | ||||||| Sbjct 1362 GAGTCCCGCTCCGGGCACCAAA 1341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 231347071833560