Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq25273 132 4e-26 seq44371 118 1e-21 seq44017 111 1e-19 >seq25273 Length=2210 Score = 132 bits (146), Expect = 4e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 ||||| || ||| | || || | || || || ||||| || | ||||| || |||| | Sbjct 1965 ATGCAAATTTTTGTCAAGACATTGACAGGCAAGACTATCACTTTAGAAGTTGA-GCCATC 1907 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||| || | |||| ||||| ||||||||||| || || || || ||||| ||||| Sbjct 1906 CGATACTATTGAAAATGTAAAGGCCAAGATCCAAGATAAGGAGGGTATTCCTCCAGATCA 1847 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||||||| |||||||| || || ||||||||||| | | | | || ||||| Sbjct 1846 GCAACGTTTAATCTTTGCTGGCAAGCAGCTGGAGGACGGACGTACTCTAGCCGACTATAA 1787 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 ||| || |||||||||||||| || |||||| | || | |||||||||| Sbjct 1786 CATACAGAAGGAATCGACACTCCATTTGGTGCTTCGTCTTCGCGGAGGCG 1737 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || | || || ||||| || || | ||||| || |||| Sbjct 2193 ATGCAAATCTTCGTGAAGACTTTGACTGGCAAAACCATCACCTTGGAAGTCGA-GCCATG 2135 Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | ||||| || |||||||| |||||||| || || || ||||| Sbjct 2134 TGACACTATCGAGAACGTAAAGGCTAAAATCCAAGATAAAGAAGGCATTCCCCCAGATCA 2075 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||||| || || || || || || |||| ||| | | |||| || || || Sbjct 2074 ACAACGTTTAATTTTCGCTGGCAAGCAATTGGAAGATGGCCGTGCCTTGTCCGACTACAA 2015 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| |||||||| || || || |||||||| | || ||||| || || Sbjct 2014 CATCCAAAAGGAGTCTACCCTTCACTTGGTCCTCCGCTTGCGTGGTGG 1967 >seq44371 Length=3624 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| ||||||| || || |||||||| || || || || || ||| | | Sbjct 1321 ATGCAAATTTTTGTTAAAACTCTTACGGGTAAAACCATCACACTTGAGGTTGAACCTTCG 1262 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | ||| || ||| ||||| |||||||| |||||||| || || || || Sbjct 1261 GATACTATTGAACATGTTAAAGCTAAGATTCAAGACAAGGAAGGAATTCCACCTGACCAG 1202 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| || || || || || ||||| |||| || ||| | || | ||||||||| Sbjct 1201 CAACGCTTAATTTTCGCTGGCAAACAATTGGAAGACGGACGAACCTTGGCTGATTATAAC 1142 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||||||||||| || | || | || ||||| Sbjct 1141 ATTCAAAAGGAATCTACGTTGCATCTAGTATTGCG 1107 >seq44017 Length=1387 Score = 111 bits (122), Expect = 1e-19 Identities = 189/269 (70%), Gaps = 4/269 (1%) Strand=Plus/Minus Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212 |||||| || ||||| | ||| |||| || || ||||| || | | ||||||||| || Sbjct 441 TTTATCAACTGTAAATTGTATAGCATTTGCAGCCGGTTTGGTACGTAAATAATACATGCC 382 Query 138213 CGTTTTTA-ACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCG 138271 ||||| | |||| |||| | | || | ||||| || || || | || | | Sbjct 381 AGTTTTGAGACCCGCCTTCCAAC-CATAAAAATGTATAGATGTTAGCTTGCCATAGTTTG 323 Query 138272 GTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGG 138331 ||| || | | ||| |||||||||||||| ||||| || || ||||| |||||| || Sbjct 322 GTTCAGCTACATGTATATTAAACGATTGACTTTGATCAATAAACGCGCCACGATCAGCGG 263 Query 138332 CCATGTTAATT-AAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATA 138390 |||| || ||| | | || || | || |||||||| |||||||| || ||||| || Sbjct 262 CCATCTTCATTGTAGTCTTCACCGAT-ATTTCCCACACAGTCTTGTAAAGTTCACGTATT 204 Query 138391 TGTCGCGGTATTGTTGCAATATTTTGAAT 138419 | | | ||||| | | ||||| ||| || Sbjct 203 TTTTGTGGTATAGATTCAATACCTTGTAT 175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449521080698560