Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq44371 149 5e-31 seq25273 131 1e-25 >seq44371 Length=3624 Score = 149 bits (164), Expect = 5e-31 Identities = 173/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| || | ||||| || | ||| | ||| ||||| ||||||||||||||||| || Sbjct 1094 TCCTCCTCTGAGACGCAATACTAGATGCAACGTAGATTCCTTTTGAATGTTATAATCAGC 1153 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||| || || || | |||||||||||| | || || | |||||| || || || Sbjct 1154 CAAGGTTCGTCCGTCTTCCAATTGTTTGCCAGCGAAAATTAAGCGTTGCTGGTCAGGTGG 1213 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| || || |||||||| ||| || | ||| ||| ||| | ||| || ||| |||| | Sbjct 1214 AATTCCTTCCTTGTCTTG-AATCTTAGCTTTAACATGTTCAATAGTATCCGAAGGTTCAA 1272 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTT 29788 | ||||| || || ||||| || || | ||||||||||| || ||||||| Sbjct 1273 CCTCAAGTGTGATGGTTTTACCCGTAAGAGTTTTAACAAAAATTTGCATTT 1323 >seq25273 Length=2210 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||| ||||||||||| || || ||||| || || |||||||| || || Sbjct 1739 CCTCCGCGAAGACGAAGCACCAAATGGAGTGTCGATTCCTTCTGTATGTTATAGTCGGCT 1798 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || || || || || ||||||||| | || || | ||||||||| || ||| Sbjct 1799 AGAGTACGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGAGGA 1858 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| || ||||| | || || ||| |||| | ||| || || | || ||| Sbjct 1859 ATACCCTCCTTATCTTGGATCTTGGCCTTTACATTTTCAATAGTATCGGATGGCTCAACT 1918 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| ||||| ||||| || || || || ||||| || ||||| Sbjct 1919 TCTAAAGTGATAGTCTTGCCTGTCAATGTCTTGACAAAAATTTGCAT 1965 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | ||| || || ||||| ||||| || || || ||||| ||||| || || | Sbjct 1967 CCACCACGCAAGCGGAGGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGGAC 2026 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || | ||| |||||||| | || || | ||| ||||| || ||| Sbjct 2027 AAGGCACGGCCATCTTCCAATTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGGGGA 2086 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||| ||||| | ||| || || | || | ||||||| | | || ||| Sbjct 2087 ATGCCTTCTTTATCTTGGATTTTAGCCTTTACGTTCTCGATAGTGTCACATGGCTCGACT 2146 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || ||||||||||| || || || || || || ||||| Sbjct 2147 TCCAAGGTGATGGTTTTGCCAGTCAAAGTCTTCACGAAGATTTGCAT 2193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384904869800232