Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_023557.1 Length=271084 Score E Sequences producing significant alignments: (Bits) Value seq66611 178 2e-39 seq66944 98.7 2e-15 seq66562 89.7 9e-13 >seq66611 Length=1920 Score = 178 bits (196), Expect = 2e-39 Identities = 365/537 (68%), Gaps = 33/537 (6%) Strand=Plus/Minus Query 71875 GAAGCCATCCGCTTCTATGTCTCGTTTGCCTGCTCGTTTGCCTTTGCTGAACGCGAGCTG 71934 ||||| || || || || || |||||||| || || || ||||| || || || || Sbjct 1848 GAAGCGATACGTTTTTACGTAAGTTTTGCCTGTTCTTTCGCTTTTGCAGAGCGTGAACTT 1789 Query 71935 ATGGAAGGCAACGCCAAGATCATTAAACTGATCGCCCGTGATGAAGCCCTGCATCTGACC 71994 |||||||| || || || || |||||||| || |||||||| ||||| | || | ||| Sbjct 1788 ATGGAAGGTAATGCTAAAATAATTAAACTTATTGCCCGTGACGAAGCGTTACACTTAACC 1729 Query 71995 GGCACCCAGCACATGATCATGTTAAT--GAAGTCCGGTGCTGACGATGCTGAGATGGCGG 72052 || || ||||| || | | ||| | | ||| || | || ||| | || ||||| Sbjct 1728 GGAACTCAGCATATTTTAAACTTACTACGTAGT--GGCGAAGATGATCCGGAAATGGCTA 1671 Query 72053 AAATCGTTAAAGAGTGT------GAAGCAGAAACATACGCACTCTTTAAGGACGCTGCAG 72106 |||| | ||||| ||| ||| | | ||| | | |||| || || | Sbjct 1670 AAATTGCCAAAGAATGTCGCCATGAATGTTATA-ATATGTTCGTTTTA-----GCAGCTG 1617 Query 72107 AGCAGGAGAAAGACTGGGCGAACTATCTATTCCAGGACGGGTCGATGATCGGTCTGAACA 72166 ||||||| ||||| ||||| | ||| | ||| ||||| || ||||| |||||||| | Sbjct 1616 AGCAGGAAAAAGAATGGGCAGAATATTTGTTCAGTGACGGTTCTATGATAGGTCTGAATA 1557 Query 72167 AAGAGATCGTGTGCCAGTACATCGAATACATCACCAACATCCGTATTCGCGCCATCGGTT 72226 | || || | || ||||| || || || ||||| || ||||| || || ||| | Sbjct 1556 AGGATATTCTATGGCAGTATATTGAGTATATCACTAATATCCGCATGAATGCAGTCGATC 1497 Query 72227 ACGATGACATCTACGCCGGTGTCAA------AGCTAACCCAATCCCATGGATCAACTCCT 72280 ||| |||| | |||| | | ||||||||||| ||||| || || | Sbjct 1496 TTGAT-----CTACCCT----TCAAGACCCGATCAAACCCAATCCCTTGGATTAATTCTT 1446 Query 72281 GGTTGGTTTCTGACAACGTGCAAGTCGCTCCACAGGAAGTGGAAGTAAGTTCTTATCTGG 72340 || | || ||||| || |||||||| || ||||||||||| ||||| || || ||| ||| Sbjct 1445 GGCTAGTCTCTGATAATGTGCAAGTTGCACCACAGGAAGTTGAAGTTAGCTCCTATTTGG 1386 Query 72341 TCGGTCAGATAGACTCGAAAGTGGACGCCAACGAT-TTCGACGATTTCCAACTGTAA 72396 |||| ||||| || || |||| ||| | ||| || || || ||| |||| ||| Sbjct 1385 TCGGACAGATTGATTCTGAAGTCAGTGCCGATGATCTTAGA-GAATTCGAACTATAA 1330 >seq66944 Length=5658 Score = 98.7 bits (108), Expect = 2e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 71289 TAAAAACGATCAGATGGCTGAACCGATGTTCCTGGGTCAGTCGGTTAACGTCTCACGTTA 71348 |||||| || ||| | || || ||||| | |||||| |||||||| | |||| | Sbjct 159 TAAAAATGACCAGCTAAAGGAGCCTATGTTTTTTGGTCAGCCGGTTAACATTGCACGCTT 100 Query 71349 TGATCAGCAGAAGTACCCCGCGTTCGAAAAGCTGATTGAGAAACAACTTTCATTCTTCTG 71408 ||| || || || || || |||||||| ||||| ||||||||||| |||||||| Sbjct 99 TGACCAACAAAAATATGGTATTTTTGAAAAGCTAATTGAAAAACAACTTTCTTTCTTCTG 40 Query 71409 GCGACCTGAAGAGGTGGATGTTTC 71432 ||| || |||||||||||||| || Sbjct 39 GCGTCCAGAAGAGGTGGATGTATC 16 >seq66562 Length=1824 Score = 89.7 bits (98), Expect = 9e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165194 TCTATAGTTCAGTCGGTAGAACAGCGGACTGTTAATCCGTAGGTCGCTGGTTCGAATCCA 165253 ||| |||||||| |||||||| |||||||||||||||||| ||| |||||||||||||| Sbjct 1299 TCTGTAGTTCAGCAGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAATCCA 1240 Query 165254 GCTAGACCAGCCAA 165267 | ||| |||||| Sbjct 1239 GTCAGAGGAGCCAA 1226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 866614922484480