Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_023561.1 Length=173276 Score E Sequences producing significant alignments: (Bits) Value seq66944 219 5e-52 seq66733 87.8 2e-12 seq66660 84.2 2e-11 >seq66944 Length=5658 Score = 219 bits (242), Expect = 5e-52 Identities = 320/451 (71%), Gaps = 6/451 (1%) Strand=Plus/Plus Query 145932 ACATCAGGTCGTTGATTTGAACACCGTAATCCAAGTGACGAATTCGGTTTTCATCTACGC 145991 ||||||| | || | ||||||||| || |||| |||||||| ||||| || ||||||| Sbjct 1510 ACATCAGTTTATTCAATTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGC 1569 Query 145992 CTTTGTTGTTCTTGAGTACGAGGAGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACA 146051 | ||| ||||| | || || | |||| |||||||||||||| ||||||||| | | Sbjct 1570 CACGGTTATTCTTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATA 1629 Query 146052 ATGTCGCCGCGCCACCGCGAACTCCACCTTGGGAGCAAGACTTAACTGCTGTTTGGATGT 146111 ||| || || |||||||| || |||||||| || ||||| |||||||| || || | || Sbjct 1630 GTGTTGCAGCACCACCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGT 1689 Query 146112 GTTTCCAGAAAGGAATAACTCCAGTATGCTTGACTTCTCCGAAGCCGATTTTTGAACCTT 146171 |||| | || || ||| || ||||| |||| || | | | | |||| | Sbjct 1690 GTTTATAAAATGGGATACAACCCGTATGAAAAGCTTCGCC---GTCACGTATCGAACTTC 1746 Query 146172 C---TGCACGAATCATACCTGCGTTAATGCCGATACCAGCACGTTTAGAGATGTACTCTA 146228 | |||||||| ||| || |||||||| |||||||| |||| || | || | | Sbjct 1747 CCAAGGCACGAATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCA 1806 Query 146229 CAATTGATTCAGCAGATTTGTTAATTGATTTCAGTGAATCACCAGCTTCAATAACAACGC 146288 |||||| | || | ||||| || | || |||||| | ||||| | |||| Sbjct 1807 CAATTGCACTTGAAGTTGCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTACGC 1866 Query 146289 AAGAACTGAATTGACGAGTAGGAGTACGAGCACCTGCCATAATAGGAGTAGGCAGAGAAA 146348 | |||||||| || ||| |||| || || |||| | ||| || || || |||| ||||| Sbjct 1867 AGGAACTGAACTGGCGAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGAAA 1926 Query 146349 TTTTCTTAGTTGACACAGCATCGTAAAAACG 146379 |||| |||||| | ||||||||| || || Sbjct 1927 TTTTAAAAGTTGAAATAGCATCGTAGAAGCG 1957 >seq66733 Length=2293 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 74607 TTTGGTGACCCCAGCAGGACTCGAACCTGCAACCTAGCGATTATGAGTCGCGTGCTCTAA 74666 ||||||| ||||||| ||||| ||||| || ||| |||||||||||||| | ||||||| Sbjct 630 TTTGGTGGCCCCAGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCACACGCTCTAA 571 Query 74667 CCAATTGAGCTATAGGGCCAAAG 74689 || |||||||| |||||| || Sbjct 570 CCGTCTGAGCTATGGGGCCAGAG 548 >seq66660 Length=2041 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 72104 TGGTGCCGGTTAACGGATTCGAACCGCTGACCCTCTCATTACAAATGAGCTGCTCTACCA 72163 ||||||||| || |||| |||||| | ||||| || ||||||| | || |||||||||| Sbjct 612 TGGTGCCGGCTACCGGAGTCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCA 553 Query 72164 ACTGAGCTAAACCGGC 72179 |||||||||| ||||| Sbjct 552 ACTGAGCTAAGCCGGC 537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553891260133120